STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ98733.1Conserved hypothetical protein belonging to the DUF159 family; Localized in the cytoplasm; Belongs to the SOS response-associated peptidase family. (236 aa)    
Predicted Functional Partners:
CAZ98732.1
Conserved hypothetical protein; Localized in the cytoplasm.
       0.661
comM
ComM is induced during competence development. Not needed for DNA uptake. May be involved in a recombination step; Belongs to the Mg-chelatase subunits D/I family, ComM subfamily; Localized in the cytoplasm; High confidence in function and specificity.
       0.623
quiP
Acyl-homoserine lactone acylase, family S45; Acyl-homoserine lactone acylase catalyzes the deacylation of acyl-homoserine lactone (AHL or acyl-HSL), releasing homoserine lactone (HSL) and the corresponding fatty acid; Belongs to the family 45 of the serine peptidases (45); Signal peptide cleaved between the residues 26 and 27; Localized in the periplasmic space; High confidence in function and specificity.
       0.502
CAZ96842.1
Integrases are tyrosine recombinases that act by catalyzing the cutting and rejoining of the recombining DNA molecules utilizing a catalytic tyrosine for the strand cleavage. The cleavage of DNA is realized by a series of staggered cuts, during which the protein becomes covalently linked to the DNA through a catalytic tyrosine residue; Contains a C-terminal Phage integrase domain; Belongs to the \phage\ integrase family, Tn4399-type Integrase subfamily; Localized in the cytoplasm; Family membership.
  
    0.459
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.