Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CAZ98778.1 | CAZ98779.1 | ZOBELLIA_4643 | ZOBELLIA_4644 | The AraC-type transcriptional regulators are usually involved in the positive regulation of catabolic, metabolic and transport operons; Contains a C-terminal AraC-type HTH DNA-binding domain involved in the binding of the protein to the operator sequences in the DNA and a N-terminal domain presumed to interact with effector molecules and may be involved in dimerization; Localized in the cytoplasm; Family membership. | Fasciclin repeats protein; Conserved protein containing two fascilin domains. These domains, also known as FAS1 or BIgH3 domains, are extracellular modules of about 140 amino acid residues. Each fascilin domain consists of seven-stranded wedge and at least five alpha helices; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 25 and 26, Localized in the outer membrane; Family membership. | 0.446 |
| CAZ98779.1 | CAZ98778.1 | ZOBELLIA_4644 | ZOBELLIA_4643 | Fasciclin repeats protein; Conserved protein containing two fascilin domains. These domains, also known as FAS1 or BIgH3 domains, are extracellular modules of about 140 amino acid residues. Each fascilin domain consists of seven-stranded wedge and at least five alpha helices; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 25 and 26, Localized in the outer membrane; Family membership. | The AraC-type transcriptional regulators are usually involved in the positive regulation of catabolic, metabolic and transport operons; Contains a C-terminal AraC-type HTH DNA-binding domain involved in the binding of the protein to the operator sequences in the DNA and a N-terminal domain presumed to interact with effector molecules and may be involved in dimerization; Localized in the cytoplasm; Family membership. | 0.446 |
| CAZ98779.1 | ccpA3 | ZOBELLIA_4644 | ZOBELLIA_4645 | Fasciclin repeats protein; Conserved protein containing two fascilin domains. These domains, also known as FAS1 or BIgH3 domains, are extracellular modules of about 140 amino acid residues. Each fascilin domain consists of seven-stranded wedge and at least five alpha helices; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 25 and 26, Localized in the outer membrane; Family membership. | The Di-heme cytochrome c peroxidase reduces hydrogen peroxide to water using c-type heme as an oxidizable substrate. However, since it possesses two, instead of one, heme prosthetic groups, CcpA reduce hydrogen peroxide without the need to generate semi-stable free radicals; CcpA is structured into two domains, each containing one c-type heme group, with a calcium-binding site at the domain interface; Putative lipoprotein signal peptide cleaved between the residues 16 and 17; Possibly localized in the outer membrane; High confidence in function and specificity. | 0.516 |
| ccpA3 | CAZ98779.1 | ZOBELLIA_4645 | ZOBELLIA_4644 | The Di-heme cytochrome c peroxidase reduces hydrogen peroxide to water using c-type heme as an oxidizable substrate. However, since it possesses two, instead of one, heme prosthetic groups, CcpA reduce hydrogen peroxide without the need to generate semi-stable free radicals; CcpA is structured into two domains, each containing one c-type heme group, with a calcium-binding site at the domain interface; Putative lipoprotein signal peptide cleaved between the residues 16 and 17; Possibly localized in the outer membrane; High confidence in function and specificity. | Fasciclin repeats protein; Conserved protein containing two fascilin domains. These domains, also known as FAS1 or BIgH3 domains, are extracellular modules of about 140 amino acid residues. Each fascilin domain consists of seven-stranded wedge and at least five alpha helices; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 25 and 26, Localized in the outer membrane; Family membership. | 0.516 |