Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CAZ98793.1 | CAZ98797.1 | ZOBELLIA_4658 | ZOBELLIA_4662 | Galactonate dehydratase is involved in the galactose metabolism. It converts the D-galactonate to 2-dehydro-3-deoxy-D-galactonate; Contains a N-terminal domain with a Enolase N-terminal domain-like fold and a C-terminal TIM alpha/beta barrel fold; Belongs to the Mandelate racemase / muconate lactonizing enzyme family; Localized in the cytoplasm; High confidence in function and specificity. | The long chain dehydrogenases/reductases are zinc-containing enzymes. Zinc-dependant enzymes are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit where one of the zinc atom is essential for catalytic activity while the other is not. The catalytic zinc is coordinated by two cysteines and one histidine; Contains a C-terminal domain having a classical Rossman-fold that reversibly binds NAD(H); The N-terminal domain of alcohol dehydrogenase-like proteins have a GroES-like fold; Localized in the cytoplasm; Family membership. | 0.826 |
| CAZ98793.1 | CAZ98801.1 | ZOBELLIA_4658 | ZOBELLIA_4666 | Galactonate dehydratase is involved in the galactose metabolism. It converts the D-galactonate to 2-dehydro-3-deoxy-D-galactonate; Contains a N-terminal domain with a Enolase N-terminal domain-like fold and a C-terminal TIM alpha/beta barrel fold; Belongs to the Mandelate racemase / muconate lactonizing enzyme family; Localized in the cytoplasm; High confidence in function and specificity. | Conserved hypothetical membrane protein; Contains a N-terminal transmembrane segement followed by three tetratricopeptide repeats (TPR) and a C-terminal LuxR-type HTH domain. Between the TPR and HTH domains a second transmembrane segement is present; This Protein could interact with the DNA (transcriptional control or transcription factor); Probably localized in the cytoplasmic membrane; Conserved hypothetical protein. | 0.524 |
| CAZ98793.1 | agaD | ZOBELLIA_4658 | ZOBELLIA_4243 | Galactonate dehydratase is involved in the galactose metabolism. It converts the D-galactonate to 2-dehydro-3-deoxy-D-galactonate; Contains a N-terminal domain with a Enolase N-terminal domain-like fold and a C-terminal TIM alpha/beta barrel fold; Belongs to the Mandelate racemase / muconate lactonizing enzyme family; Localized in the cytoplasm; High confidence in function and specificity. | Beta-agarase D, family GH16; Cleaves the beta-1,4-linkages between beta-D-galactose and alpha-L-3,6-anhydro-galactose residues in agarose. Cleaves agarose in a random manner with retention of the anomeric-bond configuration, producing beta-anomers that give rise progressively to alpha-anomers when mutarotation takes place. Requires at least 4 consecutive agarose units and is highly intolerant to modifications. | 0.680 |
| CAZ98793.1 | ahgA | ZOBELLIA_4658 | ZOBELLIA_4663 | Galactonate dehydratase is involved in the galactose metabolism. It converts the D-galactonate to 2-dehydro-3-deoxy-D-galactonate; Contains a N-terminal domain with a Enolase N-terminal domain-like fold and a C-terminal TIM alpha/beta barrel fold; Belongs to the Mandelate racemase / muconate lactonizing enzyme family; Localized in the cytoplasm; High confidence in function and specificity. | Conserved hypothetical protein; Contains a lipoprotein signal peptide cleaved between the residues 18 and 19; Localized in the outer membrane; Belongs to the glycosyl hydrolase 43 family. | 0.859 |
| CAZ98793.1 | bgaF | ZOBELLIA_4658 | ZOBELLIA_4655 | Galactonate dehydratase is involved in the galactose metabolism. It converts the D-galactonate to 2-dehydro-3-deoxy-D-galactonate; Contains a N-terminal domain with a Enolase N-terminal domain-like fold and a C-terminal TIM alpha/beta barrel fold; Belongs to the Mandelate racemase / muconate lactonizing enzyme family; Localized in the cytoplasm; High confidence in function and specificity. | Beta-galactosidase, family GH2; Enzyme belonging to the family 2 of glycoside hydrolases (GH2) which catalyzes the hydrolysis of the beta-1,4 linkage at the terminal non-reducing of beta-D-galactosides, releasing a beta-D-galactose residue; Signal peptide of lipoprotein cleaved between residues 17 and 18; Possibly localized in the outer membrane; High confidence in function and specificity. | 0.490 |
| CAZ98793.1 | kduD1 | ZOBELLIA_4658 | ZOBELLIA_4661 | Galactonate dehydratase is involved in the galactose metabolism. It converts the D-galactonate to 2-dehydro-3-deoxy-D-galactonate; Contains a N-terminal domain with a Enolase N-terminal domain-like fold and a C-terminal TIM alpha/beta barrel fold; Belongs to the Mandelate racemase / muconate lactonizing enzyme family; Localized in the cytoplasm; High confidence in function and specificity. | 2-deoxy-D-gluconate-3-dehydrogenase; Enzyme that belongs to the Pentose and glucuronate interconversions pathway; Belongs to the short-chain dehydrogenases/reductases (SDR) family, Glucose/ribitol dehydrogenase subfamily; Most dehydrogenases possess at least 2 domains, the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis; Localized in the cytoplasm; High confidence in function and specificity. | 0.801 |
| CAZ98793.1 | porA | ZOBELLIA_4658 | ZOBELLIA_2600 | Galactonate dehydratase is involved in the galactose metabolism. It converts the D-galactonate to 2-dehydro-3-deoxy-D-galactonate; Contains a N-terminal domain with a Enolase N-terminal domain-like fold and a C-terminal TIM alpha/beta barrel fold; Belongs to the Mandelate racemase / muconate lactonizing enzyme family; Localized in the cytoplasm; High confidence in function and specificity. | Beta-porphyranase A, family GH16; Cleaves the sulfated polysaccharide porphyran at the (1->4) linkages between beta-D-galactopyranose and alpha-L-galactopyranose-6- sulfate, forming mostly the disaccharide alpha-L-galactopyranose-6- sulfate-(1->3)-beta-D-galactose. Some longer oligosaccharides of even number of residues are also observed. Inactive on the non-sulfated agarose portion of the porphyran backbone. Displays a strict requirement for C6-sulfate in the -2 and +1-binding subsites. | 0.511 |
| CAZ98793.1 | porB | ZOBELLIA_4658 | ZOBELLIA_1017 | Galactonate dehydratase is involved in the galactose metabolism. It converts the D-galactonate to 2-dehydro-3-deoxy-D-galactonate; Contains a N-terminal domain with a Enolase N-terminal domain-like fold and a C-terminal TIM alpha/beta barrel fold; Belongs to the Mandelate racemase / muconate lactonizing enzyme family; Localized in the cytoplasm; High confidence in function and specificity. | Beta-porphyranase B, family GH16; Cleaves the sulfated polysaccharide porphyran at the (1->4) linkages between beta-D-galactopyranose and alpha-L-galactopyranose-6- sulfate, forming mostly the disaccharide alpha-L-galactopyranose-6- sulfate-(1->3)-beta-D-galactose. Some longer oligosaccharides of even number of residues are also observed. Inactive on the non-sulfated agarose portion of the porphyran backbone. In contrast to PorA, tolerates the presence of 3-6-anhydro-L-galactose in subsite -2. | 0.581 |
| CAZ98793.1 | porE | ZOBELLIA_4658 | ZOBELLIA_3640 | Galactonate dehydratase is involved in the galactose metabolism. It converts the D-galactonate to 2-dehydro-3-deoxy-D-galactonate; Contains a N-terminal domain with a Enolase N-terminal domain-like fold and a C-terminal TIM alpha/beta barrel fold; Belongs to the Mandelate racemase / muconate lactonizing enzyme family; Localized in the cytoplasm; High confidence in function and specificity. | Beta-porphyranase E, family GH16; Cleaves the sulfated polysaccharide porphyran at the (1->4) linkages between beta-D-galactopyranose and alpha-L-galactopyranose-6- sulfate, forming mostly the disaccharide alpha-L-galactopyranose-6- sulfate-(1->3)-beta-D-galactose. | 0.547 |
| CAZ98793.1 | rhaT2 | ZOBELLIA_4658 | ZOBELLIA_4656 | Galactonate dehydratase is involved in the galactose metabolism. It converts the D-galactonate to 2-dehydro-3-deoxy-D-galactonate; Contains a N-terminal domain with a Enolase N-terminal domain-like fold and a C-terminal TIM alpha/beta barrel fold; Belongs to the Mandelate racemase / muconate lactonizing enzyme family; Localized in the cytoplasm; High confidence in function and specificity. | L-rhamnose/proton symporter is involved in the uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell. Can also transport L-mannose and L-xylose, but at reduced rates. Contains ten transmembrane helices; Localized in the cytoplasmic membrane; High confidence in function and specificity. | 0.700 |
| CAZ98797.1 | CAZ98793.1 | ZOBELLIA_4662 | ZOBELLIA_4658 | The long chain dehydrogenases/reductases are zinc-containing enzymes. Zinc-dependant enzymes are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit where one of the zinc atom is essential for catalytic activity while the other is not. The catalytic zinc is coordinated by two cysteines and one histidine; Contains a C-terminal domain having a classical Rossman-fold that reversibly binds NAD(H); The N-terminal domain of alcohol dehydrogenase-like proteins have a GroES-like fold; Localized in the cytoplasm; Family membership. | Galactonate dehydratase is involved in the galactose metabolism. It converts the D-galactonate to 2-dehydro-3-deoxy-D-galactonate; Contains a N-terminal domain with a Enolase N-terminal domain-like fold and a C-terminal TIM alpha/beta barrel fold; Belongs to the Mandelate racemase / muconate lactonizing enzyme family; Localized in the cytoplasm; High confidence in function and specificity. | 0.826 |
| CAZ98797.1 | CAZ98801.1 | ZOBELLIA_4662 | ZOBELLIA_4666 | The long chain dehydrogenases/reductases are zinc-containing enzymes. Zinc-dependant enzymes are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit where one of the zinc atom is essential for catalytic activity while the other is not. The catalytic zinc is coordinated by two cysteines and one histidine; Contains a C-terminal domain having a classical Rossman-fold that reversibly binds NAD(H); The N-terminal domain of alcohol dehydrogenase-like proteins have a GroES-like fold; Localized in the cytoplasm; Family membership. | Conserved hypothetical membrane protein; Contains a N-terminal transmembrane segement followed by three tetratricopeptide repeats (TPR) and a C-terminal LuxR-type HTH domain. Between the TPR and HTH domains a second transmembrane segement is present; This Protein could interact with the DNA (transcriptional control or transcription factor); Probably localized in the cytoplasmic membrane; Conserved hypothetical protein. | 0.541 |
| CAZ98797.1 | agaD | ZOBELLIA_4662 | ZOBELLIA_4243 | The long chain dehydrogenases/reductases are zinc-containing enzymes. Zinc-dependant enzymes are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit where one of the zinc atom is essential for catalytic activity while the other is not. The catalytic zinc is coordinated by two cysteines and one histidine; Contains a C-terminal domain having a classical Rossman-fold that reversibly binds NAD(H); The N-terminal domain of alcohol dehydrogenase-like proteins have a GroES-like fold; Localized in the cytoplasm; Family membership. | Beta-agarase D, family GH16; Cleaves the beta-1,4-linkages between beta-D-galactose and alpha-L-3,6-anhydro-galactose residues in agarose. Cleaves agarose in a random manner with retention of the anomeric-bond configuration, producing beta-anomers that give rise progressively to alpha-anomers when mutarotation takes place. Requires at least 4 consecutive agarose units and is highly intolerant to modifications. | 0.473 |
| CAZ98797.1 | ahgA | ZOBELLIA_4662 | ZOBELLIA_4663 | The long chain dehydrogenases/reductases are zinc-containing enzymes. Zinc-dependant enzymes are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit where one of the zinc atom is essential for catalytic activity while the other is not. The catalytic zinc is coordinated by two cysteines and one histidine; Contains a C-terminal domain having a classical Rossman-fold that reversibly binds NAD(H); The N-terminal domain of alcohol dehydrogenase-like proteins have a GroES-like fold; Localized in the cytoplasm; Family membership. | Conserved hypothetical protein; Contains a lipoprotein signal peptide cleaved between the residues 18 and 19; Localized in the outer membrane; Belongs to the glycosyl hydrolase 43 family. | 0.905 |
| CAZ98797.1 | kduD1 | ZOBELLIA_4662 | ZOBELLIA_4661 | The long chain dehydrogenases/reductases are zinc-containing enzymes. Zinc-dependant enzymes are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit where one of the zinc atom is essential for catalytic activity while the other is not. The catalytic zinc is coordinated by two cysteines and one histidine; Contains a C-terminal domain having a classical Rossman-fold that reversibly binds NAD(H); The N-terminal domain of alcohol dehydrogenase-like proteins have a GroES-like fold; Localized in the cytoplasm; Family membership. | 2-deoxy-D-gluconate-3-dehydrogenase; Enzyme that belongs to the Pentose and glucuronate interconversions pathway; Belongs to the short-chain dehydrogenases/reductases (SDR) family, Glucose/ribitol dehydrogenase subfamily; Most dehydrogenases possess at least 2 domains, the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis; Localized in the cytoplasm; High confidence in function and specificity. | 0.853 |
| CAZ98797.1 | porA | ZOBELLIA_4662 | ZOBELLIA_2600 | The long chain dehydrogenases/reductases are zinc-containing enzymes. Zinc-dependant enzymes are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit where one of the zinc atom is essential for catalytic activity while the other is not. The catalytic zinc is coordinated by two cysteines and one histidine; Contains a C-terminal domain having a classical Rossman-fold that reversibly binds NAD(H); The N-terminal domain of alcohol dehydrogenase-like proteins have a GroES-like fold; Localized in the cytoplasm; Family membership. | Beta-porphyranase A, family GH16; Cleaves the sulfated polysaccharide porphyran at the (1->4) linkages between beta-D-galactopyranose and alpha-L-galactopyranose-6- sulfate, forming mostly the disaccharide alpha-L-galactopyranose-6- sulfate-(1->3)-beta-D-galactose. Some longer oligosaccharides of even number of residues are also observed. Inactive on the non-sulfated agarose portion of the porphyran backbone. Displays a strict requirement for C6-sulfate in the -2 and +1-binding subsites. | 0.436 |
| CAZ98797.1 | porB | ZOBELLIA_4662 | ZOBELLIA_1017 | The long chain dehydrogenases/reductases are zinc-containing enzymes. Zinc-dependant enzymes are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit where one of the zinc atom is essential for catalytic activity while the other is not. The catalytic zinc is coordinated by two cysteines and one histidine; Contains a C-terminal domain having a classical Rossman-fold that reversibly binds NAD(H); The N-terminal domain of alcohol dehydrogenase-like proteins have a GroES-like fold; Localized in the cytoplasm; Family membership. | Beta-porphyranase B, family GH16; Cleaves the sulfated polysaccharide porphyran at the (1->4) linkages between beta-D-galactopyranose and alpha-L-galactopyranose-6- sulfate, forming mostly the disaccharide alpha-L-galactopyranose-6- sulfate-(1->3)-beta-D-galactose. Some longer oligosaccharides of even number of residues are also observed. Inactive on the non-sulfated agarose portion of the porphyran backbone. In contrast to PorA, tolerates the presence of 3-6-anhydro-L-galactose in subsite -2. | 0.628 |
| CAZ98797.1 | porE | ZOBELLIA_4662 | ZOBELLIA_3640 | The long chain dehydrogenases/reductases are zinc-containing enzymes. Zinc-dependant enzymes are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit where one of the zinc atom is essential for catalytic activity while the other is not. The catalytic zinc is coordinated by two cysteines and one histidine; Contains a C-terminal domain having a classical Rossman-fold that reversibly binds NAD(H); The N-terminal domain of alcohol dehydrogenase-like proteins have a GroES-like fold; Localized in the cytoplasm; Family membership. | Beta-porphyranase E, family GH16; Cleaves the sulfated polysaccharide porphyran at the (1->4) linkages between beta-D-galactopyranose and alpha-L-galactopyranose-6- sulfate, forming mostly the disaccharide alpha-L-galactopyranose-6- sulfate-(1->3)-beta-D-galactose. | 0.578 |
| CAZ98797.1 | rhaT2 | ZOBELLIA_4662 | ZOBELLIA_4656 | The long chain dehydrogenases/reductases are zinc-containing enzymes. Zinc-dependant enzymes are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit where one of the zinc atom is essential for catalytic activity while the other is not. The catalytic zinc is coordinated by two cysteines and one histidine; Contains a C-terminal domain having a classical Rossman-fold that reversibly binds NAD(H); The N-terminal domain of alcohol dehydrogenase-like proteins have a GroES-like fold; Localized in the cytoplasm; Family membership. | L-rhamnose/proton symporter is involved in the uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell. Can also transport L-mannose and L-xylose, but at reduced rates. Contains ten transmembrane helices; Localized in the cytoplasmic membrane; High confidence in function and specificity. | 0.686 |
| CAZ98801.1 | CAZ98793.1 | ZOBELLIA_4666 | ZOBELLIA_4658 | Conserved hypothetical membrane protein; Contains a N-terminal transmembrane segement followed by three tetratricopeptide repeats (TPR) and a C-terminal LuxR-type HTH domain. Between the TPR and HTH domains a second transmembrane segement is present; This Protein could interact with the DNA (transcriptional control or transcription factor); Probably localized in the cytoplasmic membrane; Conserved hypothetical protein. | Galactonate dehydratase is involved in the galactose metabolism. It converts the D-galactonate to 2-dehydro-3-deoxy-D-galactonate; Contains a N-terminal domain with a Enolase N-terminal domain-like fold and a C-terminal TIM alpha/beta barrel fold; Belongs to the Mandelate racemase / muconate lactonizing enzyme family; Localized in the cytoplasm; High confidence in function and specificity. | 0.524 |
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