STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ98807.1Sulfatase, family S1-16; The family 1 of sulfatases is composed of enzymes that require the posttranslational oxidation of a conserved cysteine (or serine) to a catalytic formylglycine to hydrolyze various sulfate ester substrates; Belongs to the family 1 of sulfatases (S1: formylglycine-dependent sulfatases), subfamily 16; Putative lipoprotein signal peptide cleaved between the residue 18 and 19; Possibly localized in the outer membrane; Family membership. (538 aa)    
Predicted Functional Partners:
CAZ98808.1
Carbohydrate esterase, family CE1; Carbohydrate esterases catalyze the de-O or de-N-acetylation of substituted saccharides; Belongs to the family 1 of the carbohydrate esterases (CE1); Localized in the cytoplasm; Specificity unclear.
       0.519
adhI
Alcohol dehydrogenase class 3 / S-(hydroxymethyl)glutathione dehydrogenase; Oxidizes long-chain aliphatic alcohols, long-chain hydroxylated fatty acids and S-hydroxymethylglutathione (hmGSH) in increasing order of preference. Shows little or no activity with short-chain aliphatic alcohols; Contains two zinc atoms. One is essential for catalytic activity while the other is not; Possibly involved in the metabolism of xenobiotics by cytochrome P450; Belongs to the zinc-containing alcohol dehydrogenase family, class- III subfamily; Localized in the cytoplasm; High confidence in function an [...]
  
    0.519
CAZ98810.1
Ferredoxin reductase; The oxidation of substrat by a cytochrome P450 requires the participation of a flavoprotein such as ferredoxin reductase, and an iron-sulfur protein such as ferredoxin, to mediate the transfer of electrons from NADH to P450 for oxygen activation; Uses the FAD as cofactor; Belongs to the FAD-dependent oxidoreductase family, ferredoxin-NADP reductase sub-family; Localized in the cytoplasm; Specificity unclear.
       0.437
fdxA3
Ferredoxins are electron carrier proteins with an iron-sulfur as cofactor and that transfer electrons in a wide variety of metabolic reactions. Belongs to the putidaredoxin, terpredoxin and adrenodoxin sub-family and uses 2Fe-2S cluster as cofactor ligated at four conserved cysteine residues. The general core structure consists of beta(2)-alpha-beta(2). Localized in the cytoplasm; High confidence in function and specificity.
       0.437
cypA
Cytochromes P450 are a group of heme-thiolate monooxygenases. They oxidize a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics; P450 enzymes usually act as terminal oxidases in multicomponent electron transfer chains, called P450-containing monooxygenase systems; Acts with the ferredoxin and the ferredoxin reductase; Localized in the cytoplasm; Specificity unclear.
       0.437
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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