STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ98829.1Sulfatase, family S1-17; The family 1 of sulfatases is composed of enzymes that require the posttranslational oxidation of a conserved cysteine (or serine) to a catalytic formylglycine to hydrolyze various sulfate ester substrates; Belongs to the family 1 of sulfatases (S1: formylglycine-dependent sulfatases), subfamily 17; Lipoprotein signal peptide cleaved between the residues 20 and 21; Localized in the cytoplasmic membrane or/and outer membrane; Family membership. (609 aa)    
Predicted Functional Partners:
CAZ98828.1
NAD(P)-dependent dehydrogenase. Belongs to the Rossmann fold family. Contains a twin-arginine translocation signal peptide; Localized in the periplasmic space; Specificity unclear.
  
    0.778
CAZ98830.1
The sensor proteins consist of a sensing beta-propeller fold periplasmic domain, variable in sequence, reflective of the many different environmental signals, and of a cytoplasmic part composed of a histidine kinase domain, a response regulator receiver domain and a response regulator effector domain (here a C-terminal AraC- type HTH domain); Contains one transmembrane segment; Localized in the cytoplasmic membrane; Family membership.
       0.768
fgeA
C-alpha-formylglycine-generating protein; Converts newly synthesized inactive sulfatases to their active form by modifying an active site cysteine or serine residue to 3-oxoalanine; Putatively localized in the outer membrane; Specificity unclear.
 
   0.464
CAZ98831.1
Similar to ASPIC and UnbV protein containing FG-GAP repeats; ASPIC and UnbV sequences are found associated with tetratrico peptide repeat in several paralogous proteins in Rhodopirellula baltica and with FG-GAP repeats in several eukaryotic integrin-like proteins and in several other bacterial proteins. The FG-GAP repeat has been predicted to fold into a beta propeller structure. The FG- GAP repeats are found in the N terminus of integrin alpha chains, a region that has been shown to be important for ligand binding; Contains a signal peptide uncleavable (residues 5 to 23) that would lo [...]
       0.451
CAZ98832.1
Similar to ASPIC and UnbV protein containing FG-GAP repeats; ASPIC and UnbV sequences are found associated with tetratrico peptide repeat in several paralogous proteins in Rhodopirellula baltica and with FG-GAP repeats in several eukaryotic integrin-like proteins and in several other bacterial proteins. The FG-GAP repeat has been predicted to fold into a beta propeller structure. The FG- GAP repeats are found in the N terminus of integrin alpha chains, a region that has been shown to be important for ligand binding; Contains a signal peptide of lipoprotein cleaved between the residues [...]
       0.426
gldK
Lipoprotein involved in the gliding motility that contains an unknown function domain found in some eukaryotic and prokaryotic protein and in eukaryotic proteins required for post-translational modification of sulfatase; Signal peptide cleaved between the residues 17 and 18; Putatively localized in the outer membrane; Function unclear.
 
   0.401
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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