STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ98897.1Glycosyltransferase, family GT2; Glycosyltransferase catalyzes the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. This enzyme belongs to the family 2 of the glycosyltransferases. Features two transmembrane helices in C-terminus. Localized in the cytoplasmic membrane; Specificity unclear. (333 aa)    
Predicted Functional Partners:
coaE
Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
      0.930
CAZ98896.1
Conserved hypothetical protein. Localized in the cytoplasm.
       0.641
CAZ98894.1
The sensor histidine kinase belongs to two-component signal transduction systems. It catalyzes the ATP dependent autophosphorylation of a conserved histidine in its phosphoacceptor domain and the signal dependent phosphorylation of a conserved aspartic acid present in the response regulator receiver domain; Contains two transmembrane segments; Localized in the cytoplasmic membrane; Family membership.
 
   
 0.551
fabI
Enoyl-[acyl-carrier-protein] reductase (NADH); FabI is a NADH-dependent enoyl-ACP reductase and is involved in fatty acid biosynthesis. It catalyzes the reaction : Acyl-[acyl-carrier-protein] + NAD+ = trans-2,3-dehydroacyl-[acyl-carrier-protein] + NADH. It forms a homotetramer and binds A NAD+ per subunit. Localized in the cytoplasm; High confidence in function and specificity.
       0.537
CAZ94806.1
Conserved hypothetical protein; Localized in the cytoplasm.
 
  
 0.525
CAZ96076.1
Carbohydrate esterase, family CE4; The carbohydrate esterases catalyze the de-O or de-N-acetylation of substituted saccharides. These proteins fold into a 7-stranded beta/alpha barrel; Contains a C-terminal transmembrane helix; Belongs to the family 4 of carbohydrate esterases (CE4); Localized in the cytoplasmic membrane; Specificity unclear.
  
  
 0.509
pgdA
Peptidoglycan N-acetylglucosamine deacetylase, family CE4; The peptidoglycan N-acetylglucosamine deacetylase hydrolyzes the acetyl group of N-acetylglucosamine in peptidoglycans; Belongs to the family 4 of carbohydrate esterases (CE4) and fold into a 7-stranded beta/alpha barrel; Contains two N-terminal transmembrane helices; Localized in the cytoplasmic membrane; High confidence in function and specificity.
  
  
 0.509
CAZ97763.1
Carbohydrate esterase, family CE4; Carbohydrate esterases catalyze the de-O or de-N-acetylation of substituted saccharides; Belongs to the family 4 of carbohydrate esterases (CE4). These proteins fold into a 7-stranded beta/alpha barrel; Signal peptide cleaved between residues 20 and 21; Localized in the periplasmic space; Specificity unclear.
  
  
 0.509
CAZ97867.1
Conserved hypothetical protein. Localized in the cytoplasm.
  
     0.502
CAZ98902.1
Conserved hypothetical protein. Localized in the cytoplasm.
 
     0.462
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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