STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ94555.1Conserved hypothetical membrane protein; Contains four transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein. (189 aa)    
Predicted Functional Partners:
recD
Exodeoxyribonuclease V, alpha chain; The Exonuclease V is a multifunctional nuclease required for efficient DNA repair. It catalyzes the unwinding of double-stranded DNA and the cleavage of single-stranded DNA and it stimulates local genetic recombination. All of these activities require concomitant hydrolysis of ATP; Belongs to the helicase family, UvrD subfamily; Localized in the cytoplasm; High confidence in function and specificity.
       0.596
kdsB
The 3-Deoxy-manno-octulosonate cytidylyltransferase, also known as CMP-KDO synthetase, activates KDO (a 8-carbon sugar) required for incorporation into bacterial lipopolysaccharide in Gram- negative bacteria; It binds one magnesium ion as cofactor; Localized in the cytoplasm; High confidence in function and specificity; Belongs to the KdsB family.
       0.571
nanP
N-Acylneuraminate-9-phosphatase (Neu5Ac-9-Pase)is involved in the aminosugar metabolism. It converts the N-acylneuraminate 9-phosphate to N-acylneuraminate. It binds one magnesium ion as cofactor; Belongs to the haloacid dehalogenase-like hydrolase superfamily; Localized in the cytoplasm; High confidence in function and specificity.
       0.567
CAZ94552.1
Iron-containing alcohol dehydrogenase catalyzes the reversible oxidation of ethanol to acetaldehyde with the concomitant reduction of NAD. Its exact specificity is unclear. It uses NAD as cofactor. Localized in the cytoplasm; Specificity unclear.
       0.559
CAZ95390.1
Hypothetical membrane protein; Contains a C-terminal transmembrane segment; Probably localized in the cytoplasmic membrane; Hypothetical protein.
  
     0.525
CAZ98249.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.522
CAZ94551.1
Conserved protein belonging to the acyltransferase family. Its exact function is unknown; Localized in the cytoplasm; Family membership.
       0.451
CAZ94557.1
Conserved hypothetical protein; Localized in the cytoplasm.
       0.439
CAZ94558.1
Conserved hypothetical protein; Localized in the cytoplasm.
       0.433
CAZ94559.1
Conserved hypothetical protein predicted as a methyltransferase; Localized in the cytoplasm.
       0.433
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.