STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ94565.1Conserved protein belonging to the UbiA prenyltransferase family, which includes various prenyltransferases, but also cytochrome C oxidase assembly factor. The exact function of this protein is unclear; Contains nine transmembrane helices. Localized in the cytoplasmic membrane; Family membership. (300 aa)    
Predicted Functional Partners:
CAZ94566.1
TatD family protein; Conserved protein belonging to the TatD family. These enzymes adopt a TIM barrel fold; Localized in the cytoplasm; Family membership.
 
   
 0.954
CAZ94567.1
Conserved hypothetical protein; Localized in the cytoplasm.
 
   
 0.952
CAZ94563.1
Conserved hypothetical protein; Localized in the cytoplasm.
 
   
 0.931
aroB1
3-Dehydroquinate synthase is involved in the biosynthesis of aromatic amino acids. It catalyzes the second step of the shikimate pathway, the formation of dehydroquinate and orthophosphate from 3-deoxy-D-arabino heptulosonic 7 phosphate. It forms a monomer and binds NAD and divalent metal cation as cofactors. Localized in the cytoplasm; High confidence in function and specificity.
 
   
 0.931
CAZ94562.1
Type I phosphodiesterase catalyzes the cleavage of phosphodiester and phosphosulfate bonds in various substrates such as NAD, deoxynucleotides and nucleotide sugars. The exact specificity of this enzyme is not known; Localized in the cytoplasm; Family membership.
 
   
 0.928
CAZ94178.1
Conserved hypothetical lipoprotein; Protein that contains a N-terminal domain of about 740 residues whithout any similarity then, in the C-terminal part a PKD domain and a C-type cytochrome domain are present; Lipoprotein with a signal peptide cleaved between the residues 18 and 19, Localized in the cytoplasmic or outer membrane (or both); Conserved hypothetical protein.
 
    0.760
CAZ94561.1
Conserved hypothetical membrane protein; Contains four transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
       0.672
gdhB2
Quinoprotein glucose dehydrogenase; The mature protein is a multidomain protein: The first 430 residues would be The signal peptide is cleaved between the residues 26 and 27; Protein probably localized in the outer membrane; Hypothetical protein.
 
     0.666
CAZ98541.1
Conserved protein containing a N-terminal FAD-dependent oxidoreductase domain and a C-terminal domain containing a 4Fe-4S cluster. These domains are distantly related to the D-lactate dehydrogenase and the subunit C of the glycerol-3-phosphate dehydrogenase, respectively. The function of this modular protein is unknown; Function unclear.
    
 0.580
CAZ98134.1
Conserved protein containing a putative FAD-binding domain in the N-terminal region. Features a N-terminal transmembrane helix. Localized in the cytoplasmic membrane; Conserved hypothetical protein.
    
 0.564
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.