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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ94126.1Carboxy-terminal processing peptidase, family S41; This peptidase is a modular protein that shows specific recognition for the C-terminal tripeptide, Xaa-Yaa-Zaa (preferably Ala or Leu, Ala or Tyr and Ala respectively). The cleavage occurs at a variable distance from the C-terminus; Contains a N-terminal domain of unknown function and a central PDZ domain involved in protein-protein interaction. In many cases, PDZ domain binds to a signature motif ([FYST]-X-[FVA]) occurring at the very C-terminus of target proteins; Belongs to the family S41 of the serine peptidases; Contains a putativ [...] (496 aa)    
Predicted Functional Partners:
CAZ94124.1
Conserved hypothetical protein. Localized in the cytoplasm.
 
     0.666
CAZ94123.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 19 and 20; Localized in the periplasmic space; Conserved hypothetical protein.
 
     0.606
CAZ94127.1
Carboxy-terminal processing peptidase, family S41; This peptidase is a modular protein that shows specific recognition for the C-terminal tripeptide, Xaa-Yaa-Zaa (preferably Ala or Leu, Ala or Tyr and Ala respectively). The cleavage occurs at a variable distance from the C-terminus; Contains a N-terminal domain of unknown function and a central PDZ domain involved in protein-protein interaction. In many cases, PDZ domain binds to a signature motif ([FYST]-X-[FVA]) occurring at the very C-terminus of target proteins; Belongs to the family S41 of the serine peptidases; Contains a prokary [...]
 
    
0.572
CAZ94121.1
Conserved hypothetical lipoprotein; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 20 and 21; Localized in the outer membrane; Conserved hypothetical protein.
 
     0.570
CAZ94125.1
RNA polymerase ECF-type sigma factor; Sigma factors are initiation factors of transcription that promote the attachment of RNA polymerase to promoters and are then released. They alter the specificity of promoter recognition. This family represents a group of sigma factors that are able to regulate extra cellular function (ECF). ECF-sigma factors all retain two features: the ability to respond to extra- cytoplasmic functions via the TonB-dependent transducer genes, and regulation by anti-sigma and anti-anti-sigma factors. Localized in the cytoplasm; Family membership.
       0.512
CAZ94122.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 23 and 24; Localized in the periplasmic space; Conserved hypothetical protein.
 
     0.481
CAZ94114.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 22 and 23; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.426
CAZ95546.1
SusD/RagB family lipoprotein; Protein probably involved in nutrient binding and belonging to the SusD/RagB family; Contains a lipoprotein signal peptide cleaved between the residues 23 and 24; Probably localized in the cytoplasmic membrane; Family membership.
  
   0.413
CAZ96483.1
This enzyme belongs to the family 2 of the aspartic peptidases. An activated water molecule is the nucleophile these peptidases and is bound by two aspartic residues, one from each monomer of the homo-dimeric molecule. Localized in the cytoplasm; Specificity unclear.
  
     0.408
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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