STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ94615.1vWA domain protein; Conserved protein belonging to the von Willebrand factor type A (vWA) domain family. Some VWA domain proteins have been proposed to function with MoxR-like ATPases to form a chaperone system involved in the activation of proteins by primarily mediating the insertion of metal cofactors into the substrate molecules. Contains two N-terminal transmembrane helices; Localized in the cytoplasmic membrane; Function unclear. (443 aa)    
Predicted Functional Partners:
CAZ94610.1
Conserved integral membrane protein belonging to the DUF95 family. Contains five transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
 
  
 0.957
CAZ94613.1
Conserved hypothetical membrane protein; Contains two transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
 
    0.953
CAZ94612.1
Conserved hypothetical membrane protein; Contains one central transmembrane helix; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
 
     0.952
CAZ94611.1
Conserved hypothetical membrane protein; Contains five transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
 
     0.940
CAZ94614.1
ATPase belonging to the MoxR-like family. In Paracoccus denitrificans, MoxR is involved in the regulation of formation of active methanol dehydrogenase. MoxR-like ATPases have been proposed to function with VWA domain proteins to form a chaperone system involved in the activation of proteins by primarily mediating the insertion of metal cofactors into the substrate molecules; Localized in the cytoplasm; Specificity unclear.
  
 0.922
CAZ94609.1
This family of proteins contain three highly conserved amino acids: one arginine and two aspartates, hence the name of RDD family. Contains three transmembrane helices. The arginine occurs at the N terminus of the first helix and the first aspartate occurs in the middle of this helix. The molecular function of this protein is unknown; Localized in the cytoplasmic membrane; Family membership.
 
    0.909
CAZ94616.1
Putative protein.
       0.556
CAZ94617.1
Hypothetical protein. Putatively localized in the cytoplasm.
       0.556
CAZ94608.1
Conserved membrane protein containing two UPF0126 domains. The conserved glycines are suggestive of an ion channel. Contains seven transmembrane helices; Localized in the cytoplasmic membrane; Family membership.
       0.452
CAZ95531.1
Conserved hypothetical lipoprotein; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 18 and 19; Localized in the outer membrane; Conserved hypothetical protein.
  
    0.410
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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