STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ94618.1Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 21 and 22; Localized in the periplasmic space; Conserved hypothetical protein. (339 aa)    
Predicted Functional Partners:
CAZ94981.1
Conserved protein containing a putative lipoprotein signal peptide cleaved between the residues 15 and 16; Possibly localized in the outer membrane; Conserved hypothetical protein.
  
     0.731
CAZ94619.1
Conserved hypothetical protein; Localized in the cytoplasm.
       0.689
CAZ97304.1
Conserved protein belonging to the DUF1080 family; Contains a N-terminal transmembrane helix; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.676
CAZ97303.1
Cytochrome c-containing lipoprotein; Large conserved protein containing a C-terminal cytochrome C. Cytochromes c typically function in electron transfer, but c-type cytochrome centers are also found in the active sites of many enzymes; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 24 and 25; Localized in the outer membrane; Conserved hypothetical protein.
  
     0.675
CAZ95028.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.664
CAZ94621.1
Cytochrome c-containing protein; Protein containing a N-terminal beta-propeller fold domain, three central PBS lyase HEAT-like repeats and a C-terminal cytochrome c domain. Cytochromes c typically function in electron transfer, but c-type cytochrome centers are also found in the active sites of many enzymes. Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 22 and 23; Localized in the outer membrane; Function unclear.
 
     0.642
CAZ95865.1
Conserved hypothetical protein; Contains two transmembrane segments; Protein probably localized in the cytoplasmic membrane.
  
     0.627
CAZ97307.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.622
CAZ97591.1
Possible flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases; Contains a signal peptide of lipoprotein cleaved between the residues 21 and 22; Localized in the outer membrane; Family membership.
  
     0.583
CAZ94984.1
Large conserved protein containing a C-terminal cytochrome c. Cytochromes c typically function in electron transfer, but c-type cytochrome centers are also found in the active sites of many enzymes. Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 14 and 15; Localized in the outer membrane; Family membership.
  
     0.550
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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