Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CAZ94646.1 | CAZ94647.1 | ZOBELLIA_575 | ZOBELLIA_576 | Peptidase family M14 contains mainly metallocarboxypeptidases. The single catalytic zinc ion is tetrahedrally coordinated by two histidines and a glutamate, as well as a water molecule. One of the histidines and the glutamate occur in the motif His-Xaa-Xaa-Glu; Signal peptide cleaved between the residues 18 and 19; Localized in the periplasmic space; Specificity unclear. | Conserved protein belonging to the zinc-dependent beta-lactamase superfamily. This superfamily contains various metallo-hydrolases including beta-lactamases, but also glyoxylases and arylsulfatases. The active site is characterized by several conserved histidines binding the catalytic zinc ions. The enzymes can bind one or two zinc ions. Localized in the cytoplasm; Family membership. | 0.645 |
| CAZ94646.1 | CAZ95879.1 | ZOBELLIA_575 | ZOBELLIA_1826 | Peptidase family M14 contains mainly metallocarboxypeptidases. The single catalytic zinc ion is tetrahedrally coordinated by two histidines and a glutamate, as well as a water molecule. One of the histidines and the glutamate occur in the motif His-Xaa-Xaa-Glu; Signal peptide cleaved between the residues 18 and 19; Localized in the periplasmic space; Specificity unclear. | Conserved protein distantly related to glycoside hydrolases of the family 74 (GH74). Contains a signal peptide cleaved between the residues 24 and 25; Localized in the periplasmic space. | 0.476 |
| CAZ94646.1 | CAZ97495.1 | ZOBELLIA_575 | ZOBELLIA_3357 | Peptidase family M14 contains mainly metallocarboxypeptidases. The single catalytic zinc ion is tetrahedrally coordinated by two histidines and a glutamate, as well as a water molecule. One of the histidines and the glutamate occur in the motif His-Xaa-Xaa-Glu; Signal peptide cleaved between the residues 18 and 19; Localized in the periplasmic space; Specificity unclear. | SusD/RagB family lipoprotein; Protein probably involved in nutrient binding and belonging to the SusD/RagB family; Gene very often associated with a gene encoding for a TonB-dependent receptor or transducer; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 19 and 20; Localized in the cytoplasmic membrane; Family membership. | 0.413 |
| CAZ94646.1 | CAZ98883.1 | ZOBELLIA_575 | ZOBELLIA_4748 | Peptidase family M14 contains mainly metallocarboxypeptidases. The single catalytic zinc ion is tetrahedrally coordinated by two histidines and a glutamate, as well as a water molecule. One of the histidines and the glutamate occur in the motif His-Xaa-Xaa-Glu; Signal peptide cleaved between the residues 18 and 19; Localized in the periplasmic space; Specificity unclear. | Conserved hypothetical protein. Localized in the cytoplasm. | 0.606 |
| CAZ94646.1 | bshC | ZOBELLIA_575 | ZOBELLIA_574 | Peptidase family M14 contains mainly metallocarboxypeptidases. The single catalytic zinc ion is tetrahedrally coordinated by two histidines and a glutamate, as well as a water molecule. One of the histidines and the glutamate occur in the motif His-Xaa-Xaa-Glu; Signal peptide cleaved between the residues 18 and 19; Localized in the periplasmic space; Specificity unclear. | Conserved hypothetical protein; Localized in the cytoplasm; Belongs to the BshC family. | 0.583 |
| CAZ94647.1 | CAZ94646.1 | ZOBELLIA_576 | ZOBELLIA_575 | Conserved protein belonging to the zinc-dependent beta-lactamase superfamily. This superfamily contains various metallo-hydrolases including beta-lactamases, but also glyoxylases and arylsulfatases. The active site is characterized by several conserved histidines binding the catalytic zinc ions. The enzymes can bind one or two zinc ions. Localized in the cytoplasm; Family membership. | Peptidase family M14 contains mainly metallocarboxypeptidases. The single catalytic zinc ion is tetrahedrally coordinated by two histidines and a glutamate, as well as a water molecule. One of the histidines and the glutamate occur in the motif His-Xaa-Xaa-Glu; Signal peptide cleaved between the residues 18 and 19; Localized in the periplasmic space; Specificity unclear. | 0.645 |
| CAZ94647.1 | bshC | ZOBELLIA_576 | ZOBELLIA_574 | Conserved protein belonging to the zinc-dependent beta-lactamase superfamily. This superfamily contains various metallo-hydrolases including beta-lactamases, but also glyoxylases and arylsulfatases. The active site is characterized by several conserved histidines binding the catalytic zinc ions. The enzymes can bind one or two zinc ions. Localized in the cytoplasm; Family membership. | Conserved hypothetical protein; Localized in the cytoplasm; Belongs to the BshC family. | 0.445 |
| CAZ95879.1 | CAZ94646.1 | ZOBELLIA_1826 | ZOBELLIA_575 | Conserved protein distantly related to glycoside hydrolases of the family 74 (GH74). Contains a signal peptide cleaved between the residues 24 and 25; Localized in the periplasmic space. | Peptidase family M14 contains mainly metallocarboxypeptidases. The single catalytic zinc ion is tetrahedrally coordinated by two histidines and a glutamate, as well as a water molecule. One of the histidines and the glutamate occur in the motif His-Xaa-Xaa-Glu; Signal peptide cleaved between the residues 18 and 19; Localized in the periplasmic space; Specificity unclear. | 0.476 |
| CAZ95879.1 | CAZ98883.1 | ZOBELLIA_1826 | ZOBELLIA_4748 | Conserved protein distantly related to glycoside hydrolases of the family 74 (GH74). Contains a signal peptide cleaved between the residues 24 and 25; Localized in the periplasmic space. | Conserved hypothetical protein. Localized in the cytoplasm. | 0.420 |
| CAZ97495.1 | CAZ94646.1 | ZOBELLIA_3357 | ZOBELLIA_575 | SusD/RagB family lipoprotein; Protein probably involved in nutrient binding and belonging to the SusD/RagB family; Gene very often associated with a gene encoding for a TonB-dependent receptor or transducer; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 19 and 20; Localized in the cytoplasmic membrane; Family membership. | Peptidase family M14 contains mainly metallocarboxypeptidases. The single catalytic zinc ion is tetrahedrally coordinated by two histidines and a glutamate, as well as a water molecule. One of the histidines and the glutamate occur in the motif His-Xaa-Xaa-Glu; Signal peptide cleaved between the residues 18 and 19; Localized in the periplasmic space; Specificity unclear. | 0.413 |
| CAZ98883.1 | CAZ94646.1 | ZOBELLIA_4748 | ZOBELLIA_575 | Conserved hypothetical protein. Localized in the cytoplasm. | Peptidase family M14 contains mainly metallocarboxypeptidases. The single catalytic zinc ion is tetrahedrally coordinated by two histidines and a glutamate, as well as a water molecule. One of the histidines and the glutamate occur in the motif His-Xaa-Xaa-Glu; Signal peptide cleaved between the residues 18 and 19; Localized in the periplasmic space; Specificity unclear. | 0.606 |
| CAZ98883.1 | CAZ95879.1 | ZOBELLIA_4748 | ZOBELLIA_1826 | Conserved hypothetical protein. Localized in the cytoplasm. | Conserved protein distantly related to glycoside hydrolases of the family 74 (GH74). Contains a signal peptide cleaved between the residues 24 and 25; Localized in the periplasmic space. | 0.420 |
| bshC | CAZ94646.1 | ZOBELLIA_574 | ZOBELLIA_575 | Conserved hypothetical protein; Localized in the cytoplasm; Belongs to the BshC family. | Peptidase family M14 contains mainly metallocarboxypeptidases. The single catalytic zinc ion is tetrahedrally coordinated by two histidines and a glutamate, as well as a water molecule. One of the histidines and the glutamate occur in the motif His-Xaa-Xaa-Glu; Signal peptide cleaved between the residues 18 and 19; Localized in the periplasmic space; Specificity unclear. | 0.583 |
| bshC | CAZ94647.1 | ZOBELLIA_574 | ZOBELLIA_576 | Conserved hypothetical protein; Localized in the cytoplasm; Belongs to the BshC family. | Conserved protein belonging to the zinc-dependent beta-lactamase superfamily. This superfamily contains various metallo-hydrolases including beta-lactamases, but also glyoxylases and arylsulfatases. The active site is characterized by several conserved histidines binding the catalytic zinc ions. The enzymes can bind one or two zinc ions. Localized in the cytoplasm; Family membership. | 0.445 |