STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ94704.1Conserved protein containing five thrombospondin type 3 repeats (TSP3). TSP3 are calcium binding domains; Features an uncleaved signal peptide; Localized in the cytoplasmic meembrane; Conserved hypothetical protein. (662 aa)    
Predicted Functional Partners:
CAZ94703.1
Conserved hypothetical protein; Contains a signal peptide cleaved between the residues 29 and 30; Localized in the periplasmic space.
 
     0.899
CAZ94705.1
Conserved hypothetical protein; Contains a signal peptide cleaved between the residues 18 and 19; Localized in the periplasmic space.
 
     0.806
CAZ96912.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 20 and 21; Localized in the periplasmic space; Conserved hypothetical protein.
 
     0.775
CAZ95477.1
Conserved hypothetical membrane protein; Contains an uncleavable signal sequence; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.770
CAZ95760.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 22 and 23; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.763
CAZ95761.1
Conserved hypothetical periplasmic protein; Contains a central Ig-like domain (residues 511-592); Signal peptide cleaved between the residues 26 and 27; Localized in the periplasmic space; Conserved hypothetical protein.
  
   
 0.757
CAZ96562.1
OmpA-like outer membrane protein; This protein has a modular architecture consisting of a N-terminal domain of unknown function, a central beta-propeller domain with three WD40 repeats and a C-terminal OmpA domain. OmpA-like domains are thought to be responsible for non-covalent interactions with peptidoglycan; Contains a signal peptide cleaved between the residues 19 and 20; Localized in the outer membrane; Function unclear.
  
 
   0.749
CAZ96911.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 21 and 22; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.749
CAZ95487.1
Putative membrane lipoprotein; Lipoprotein that contains a C-terminal domain of 150 residues Signal peptide cleaved between the residues 24 and 25; Localized in the outer membrane; Hypothetical protein.
  
     0.727
CAZ95839.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 23 and 24; localized in the periplasmic space; Conserved hypothetical protein.
  
 
   0.724
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.