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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ94711.1Hypothetical membrane protein; Proteins that probably binds the calcium ions; Contains fifteen type-3 thrombospondin repeats; signal peptide cleaved between the residues 33 and 34; probably localized in the outer membrane; Hypothetical protein. (1259 aa)    
Predicted Functional Partners:
CAZ94709.1
OmpA-like outer membrane protein; This protein has a modular architecture with two N-terminal TPR repeats, a central beta-propeller domain, encompassing five WD40 repeats, and a C-terminal OmpA domain. OmpA-like domain is thought to be responsible for non-covalent interactions with peptidoglycan. The tetratrico peptide repeat (TPR) is a structural motif, which mediates proteinprotein interactions. Signal peptide cleaved between the residues 21 and 22; Localized in the outer membrane; Function unclear.
 
 
   0.835
CAZ94710.1
Conserved hypothetical protein; Contains a signal peptide cleaved between the residues 29 and 30; Localized in the periplasmic space.
 
     0.834
CAZ96560.1
Conserved protein containing calx-beta domain; Contains two repeats of the calx-motif in the N-terminal domain (residues 34 to 128 and 142 to 254); The calx-motif is present as a tandem repeat in the cytoplasmic domains of Calx Na-Ca exchangers, which are used to expel calcium from cells; Signal peptide cleaved between the residues 35 and 36; Protein possibly localised in the outer membrane (PSORT result); Contains the endopeptidase Clp signature (residues 310-321; Prosite result); Conserved hypothetical protein.
  
     0.768
CAZ94799.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 22 and 23; Localized in the periplasmic space; Conserved hypothetical protein.
  
    0.758
CAZ95759.1
Conserved hypothetical protein; Putatively contains a B_ant_repeat domain (DUF 11) and a Concanavalin A-like lectin/glucanase domain in the N-terminal region; Contains also at least four BNR/Asp-box repeats (bacterial neuraminidase repeat) found in many glycoside hydrolases and in other extracellular proteins of unknown function; Signal peptide cleaved between the residues 23 and 24; Probably localized in the outer membrane.
  
     0.700
CAZ97276.1
Conserved hypothetical lipoprotein; Liporptein with a signal peptide cleaved between the residues 15 and 16; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.677
CAZ96912.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 20 and 21; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.658
CAZ98288.1
Conserved hypothetical membrane protein; Contains a N-terminal transmembrane helix; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.656
CAZ97081.1
Conserved hypothetical lipoprotein; Protein containing a bacterial Ig-like domain 1 (Big-1). Big-1 domains (~95 amino acids) are usually present in bacterial adhesion molecules of the intimin/invasin family, involved in pathogenicity. Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 25 and 26; Localized in the outer membrane; Conserved hypothetical protein.
  
     0.644
CAZ98684.1
Conserved protein containing a C-terminal OmpA-like domain. OmpA-like domains are thought to be responsible for non-covalent interactions with peptidoglycan; Signal peptide cleaved between the residues 20 and 21; Localized in the periplasmic space and/or in the outer membrane; Family membership.
 
     0.640
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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