STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ94763.1Acyl-CoA binding protein (ACBP) is a small (~10 kDa) protein that binds medium- and long-chain acyl-CoA esters with high affinity, and may act as an intra- cellular carrier of acyl-CoA esters. It is a mainly-alpha protein, consisting of 5 short alpha-helices and 3 connecting beta-strands. Localized in the cytoplasm; Family membership. (88 aa)    
Predicted Functional Partners:
CAZ94760.1
Conserved hypothetical protein; Localized in the cytoplasm.
 
     0.891
cdsA
Phosphatidate cytidylyltransferase is essential for phospholipid biosynthesis. It catalyzes the synthesis of CDP-diacylglycerol from CTP and phosphatidate: CDP-diacylglycerol is an important branch point intermediate in both prokaryotic and eukaryotic organisms. Features seven transmembrane helices. Localized in the cytoplasmic membrane; High confidence in function and specificity; Belongs to the CDS family.
 
     0.820
psd
Phosphatidylserine decarboxylase proenzyme; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
       0.820
CAZ94121.1
Conserved hypothetical lipoprotein; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 20 and 21; Localized in the outer membrane; Conserved hypothetical protein.
  
     0.765
CAZ97281.1
Conserved hypothetical protein; Localized in cytoplasm.
  
     0.762
CAZ94574.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.754
CAZ94541.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.735
CAZ95365.1
Conserved hypothetical membrane protein; Contains six transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.731
CAZ94123.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 19 and 20; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.726
CAZ98627.1
Non-peptidase protein, Family M1; Protein displaying similarity with the metallopeptidases of the family 1 (M1), but lacking the catalytic HEXXH motif; Contains a C-terminal domain of unknown function; Signal peptide cleaved between the residues 28 and 29; Localized in the periplasmic space; Family membership.
  
   
 0.723
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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