STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ94782.1Conserved hypothetical protein; Localized in the cytoplasm. (259 aa)    
Predicted Functional Partners:
CAZ94781.1
NIF3 family protein; Conserved protein belonging to the NIF3 family. NIF3 is a yeast protein interacting with the transcriptional coactivator NGG1p which is part of the ADA complex. The exact function of this interaction is unknown; Localized in the cytoplasm; Family membership; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.
 
  
 0.934
CAZ95504.1
Protein that belongs to the DksA family, which includes the DnaK suppressor protein (DksA); Contains a 4-cysteine zinc finger in the C-terminal region; Localized in the cytoplasm; Family membership.
 
     0.754
CAZ98902.1
Conserved hypothetical protein. Localized in the cytoplasm.
 
     0.754
hemD
Uroporphyrinogen-III synthase is the fourth enzyme in the heme biosynthesis pathway. It catalyzes the reaction: hydroxymethylbilane = uroporphyrinogen III + H2O. Localized in the cytoplasm; High confidence in function and specificity.
  
     0.738
CAZ96608.1
This membrane protein seems involved in the insertion of outer membrane proteins. It has two domains. The C-terminal part, a beta-barrel pore-forming region inserted in the outer membrane, is a Bacterial surface antigen (D15) domain. The N-terminal part, exposed in the periplasm, and involved in gating of the pore and binding of the substrate proteins consists of four Surface antigen variable number repeats; Belongs to the surface antigen D15 family; Signal peptide cleaved between the residues 24 and 25; Localized in the outer membrane; Family membership.
  
     0.731
CAZ97832.1
TPR repeats protein; Conserved protein containing three C-terminal tetratrico peptide repeats (TPRs). TPR repeats mediate proteinprotein interactions and the assembly of multiprotein complexes; Contains a transmembrane helix in the N-terminal region; Localized in the cytoplasmic membrane; Function unclear.
  
     0.716
CAZ98103.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.702
CAZ97848.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 20 and 21; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.700
CAZ96508.1
Contains 13 transmembrane segments; Integral cytoplasmic membrane protein; Conserved hypothetical protein.
  
     0.688
CAZ97091.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.688
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.