STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ94146.1Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 19 and 20; Localized in the periplasmic space; Conserved hypothetical protein. (301 aa)    
Predicted Functional Partners:
CAZ94147.1
Conserved hypothetical membrane protein; Contains two transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
       0.782
CAZ94596.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 20 and 21; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.670
CAZ97865.1
Conserved hypothetical protein; Signal peptide cleaved between the residues 27 and 28; Putatively localized in the outer membrane (PSORT result).
  
     0.653
CAZ95807.1
Conserved hypothetical membrane protein; Contains eight transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.629
CAZ96487.1
Conserved hypothetical membrane protein; Contains 4 transmembrane segmemts; Probably localised in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.578
CAZ96261.1
Thiol-disulfide oxidoreductase catalyzes the formation of disulfide bond in various substrates. Its exact specificity is not known; Contains a N-terminal domain of unknown function and a C-terminal Thiol-disulfide oxidoreductase domain; Belongs to the thioredoxin family; Signal peptide cleaved between residues 18 and 19; Localized in the periplasmic space; Specificity unclear.
  
     0.568
CAZ96101.1
The small permease subunit is a component of a tripartite ATP-independent periplasmic (TRAP) transport system. The two other components of the system are a second transmembrane proteins and a extracytoplasmic solute receptor. TRAP transporters are secondary carriers that use an electrochemical H+ gradient as the driving force for transport; Contains four transmembrane helices; Localized in the cytoplasmic membrane; Specificity unclear.
  
     0.555
CAZ95433.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 21 and 22; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.542
pepP1
Xaa-Pro aminopeptidase, family M24; Xaa-Pro aminopeptidase catalyzes the release of any N-terminal amino acid, including proline, that is linked to proline, even from a dipeptide or tripeptide. Belongs to the family M24 of the metallopeptidases. PepP requires two co-catalytic ions of manganese. Features a signal peptide cleaved between the residues 31 and 32. Localized in the periplasm; High confidence in function and specificity.
  
     0.486
CAZ96377.1
Kinase, aminoglycoside phosphotransferase family; Transferase transferring phosphorus-containing groups; Belongs to the aminoglycoside phosphotransferase family; Localized in the cytoplasm; Family membership.
  
     0.479
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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