STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ94147.1Conserved hypothetical membrane protein; Contains two transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein. (171 aa)    
Predicted Functional Partners:
CAZ94146.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 19 and 20; Localized in the periplasmic space; Conserved hypothetical protein.
       0.782
CAZ94756.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.769
CAZ97038.1
Conserved hypothetical protein. Localized in the cytoplasm.
  
     0.747
CAZ97071.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.729
CAZ96618.1
Conserved hypothetical membrane protein; Contains nine transmembrane segments; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.724
gldN
Protein putatively involved in the gliding motility; Signal peptide cleaved between the residues 23 and 24; Localized in the periplasmic space; Function unclear.
  
     0.717
CAZ94092.1
Conserved hypothetical protein. Features a signal peptide cleaved between the residues 21 and 22. Localized in the periplasm.
  
     0.707
mvkA
Mevalonate kinase catalyses the phosphorylation of mevalonate to phosphomevalonate from AT as donor; Uses the magnesium ions as cofactor; CTP, GTP and UTP can also act as donors; Belongs to the GHMP kinase family; Localized in the cytoplasm; High confidence in function and specificity.
  
     0.703
ruvB
Holliday junction DNA helicase; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
  
    0.701
CAZ97266.1
Metal ion transporter; This protein is a permease possibly responsible for zinc uptake; Belongs to the ZIP (zinc transporter proteins) family; Contains seven transmembrane segments; Localized in the cytoplasmic membrane; Specificity unclear.
  
     0.679
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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