STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ94819.1DinB family protein, exported; DNA damage-inducible (din) genes are coordinately regulated and together compose a global regulatory network that has been termed the SOS-like or SOB regulon; Conserved hypothetical protein. (170 aa)    
Predicted Functional Partners:
CAZ94799.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 22 and 23; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.569
CAZ94711.1
Hypothetical membrane protein; Proteins that probably binds the calcium ions; Contains fifteen type-3 thrombospondin repeats; signal peptide cleaved between the residues 33 and 34; probably localized in the outer membrane; Hypothetical protein.
  
     0.560
CAZ95740.1
Pyrroloquinoline quinone-dependent dehydrogenase; Dehydrogenase with a N-terminal domain that adopts a beta-propeller fold and binds the pyrroloquinoline quinone (PQQ) as prosthetic group. Contains also a C-type cytochrome domain with a heme group covalently bound by thioether bonds to two conserved cysteine residues; Belongs to the Quinoprotein alcohol dehydrogenase family; Putative lipoprotein signal peptide cleaved between the residues 21 and 22; Possibly localized in the outer membrane; Specificity unclear.
  
     0.522
pruA
1-pyrroline-5-carboxylate dehydrogenase is involved in L-proline degradation. It catalyzes the reaction: 1-pyrroline-5-carboxylate + NAD+ + H2O = L-glutamate + NADH. Belongs to the aldehyde dehydrogenase family and uses NAD as cofactor. Localized in the cytoplasm; High confidence in function and specificity.
       0.500
CAZ97081.1
Conserved hypothetical lipoprotein; Protein containing a bacterial Ig-like domain 1 (Big-1). Big-1 domains (~95 amino acids) are usually present in bacterial adhesion molecules of the intimin/invasin family, involved in pathogenicity. Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 25 and 26; Localized in the outer membrane; Conserved hypothetical protein.
  
     0.498
CAZ98288.1
Conserved hypothetical membrane protein; Contains a N-terminal transmembrane helix; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.493
CAZ94816.1
Conserved hypothetical membrane protein; Contains five transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
 
     0.475
CAZ98290.1
Hypothetical membrane protein; Protein that could belong to the akaline phosphatase superfamily; Contains five N-terminal transmembrane segments and three C-terminal TPR repeats involved in proteinprotein interactions and the assembly of multiprotein complexes; Localized in the cytoplasmic membrane; Hypothetical protein.
  
     0.469
CAZ98291.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 20 and 21; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.430
CAZ96560.1
Conserved protein containing calx-beta domain; Contains two repeats of the calx-motif in the N-terminal domain (residues 34 to 128 and 142 to 254); The calx-motif is present as a tandem repeat in the cytoplasmic domains of Calx Na-Ca exchangers, which are used to expel calcium from cells; Signal peptide cleaved between the residues 35 and 36; Protein possibly localised in the outer membrane (PSORT result); Contains the endopeptidase Clp signature (residues 310-321; Prosite result); Conserved hypothetical protein.
  
     0.425
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.