STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ94897.1Serine peptidase belonging to the family S12, which includes D-Ala-D-Ala carboxypeptidase B and aminopeptidase DmpB. The active site residues Ser and Lys form the catalytic dyad and are found in the motif Ser-Xaa-Thr-Lys. Localized in the cytoplasm; Specificity unclear. (362 aa)    
Predicted Functional Partners:
CAZ94898.1
Conserved hypothetical lipoprotein; Liporoteine with a signal peptide cleaved between the residues 19 and 20; Localized in the outer membrane; Conserved hypothetical protein.
       0.547
CAZ94896.1
Hypothetical protein; Signal peptide cleaved between the residues 22 and 23; Contains two transmembrane segments; Probably localized in the cytoplasmic membrane.
       0.526
CAZ96739.1
Conserved hypothetical lipoprotein; Protein belonging to the DUF1343 family. Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 20 and 21; Localized in the cytoplasmic and/or outer membrane; Conserved hypothetical protein.
  
 0.474
CAZ98285.1
Dipeptidase, family M19; Dipeptidase hydrolyzes a wide range of dipeptides. Binds two catalytic zinc ions; Belongs to the family M19 of the peptidases; Contains a putative lipoprotein signal peptide cleaved between the residues 29 and 30; Possibly localized in the outer membrane; Specificity unclear.
 
    0.417
CAZ94899.1
Conserved hypothetical protein; Signal peptide cleaved between the residues 18 and 19; Possibly localized in the outer membrane.
       0.413
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
Server load: low (28%) [HD]