STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ94898.1Conserved hypothetical lipoprotein; Liporoteine with a signal peptide cleaved between the residues 19 and 20; Localized in the outer membrane; Conserved hypothetical protein. (253 aa)    
Predicted Functional Partners:
CAZ94899.1
Conserved hypothetical protein; Signal peptide cleaved between the residues 18 and 19; Possibly localized in the outer membrane.
 
     0.920
CAZ95982.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.697
CAZ94548.1
RmlD substrate binding domain family protein; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
     0.689
CAZ98655.1
Conserved hypothetical membrane protein; Contains two N-terminal transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.662
CAZ94574.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.659
CAZ96289.1
TPR repeats protein; Protein containing six tetratrico peptide repeats (TPR). TPR repeats mediate proteinprotein interactions and the assembly of multiprotein complexes; Signal peptide cleaved between the residues 18 and 19; Localized in the periplasmic space; Function unclear.
  
     0.655
CAZ96615.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.642
CAZ95768.1
Conserved hypothetical membrane protein; Contains three transmembrane helices in the N-terminal region; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.639
CAZ98193.1
Conserved hypothetical membrane protein; Contains an uncleavable signal sequence; Localized in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.637
CAZ96487.1
Conserved hypothetical membrane protein; Contains 4 transmembrane segmemts; Probably localised in the cytoplasmic membrane; Conserved hypothetical protein.
  
     0.627
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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