STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ94929.1Conserved hypothetical membrane protein; Contains a signal peptide cleaved between the residues 18 and 19; Could be localized in the outer membrane; Conserved hypothetical protein. (833 aa)    
Predicted Functional Partners:
CAZ94121.1
Conserved hypothetical lipoprotein; Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 20 and 21; Localized in the outer membrane; Conserved hypothetical protein.
  
     0.727
CAZ95393.1
Signal peptide of lipoprotein cleaved between the residues 15 and 16; localized in the outer membrane; Hypothetical protein.
  
     0.676
CAZ96615.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.596
CAZ96554.1
Conserved hypothetical protein; Features a signal peptide cleaved between the residues 20 and 21; Localized in the periplasm.
  
     0.592
CAZ95985.1
Conserved hypothetical periplasmic protein; Contains three MORN repeat variants. The MORN (Membrane Occupation and Recognition Nexus) repeat is found in multiple copies in several proteins. Signal peptide cleaved between the residues 21 and 22; Localized in periplasmic space; Conserved hypothetical protein.
  
     0.582
CAZ95019.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 18 and 19; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.580
pdhB
Pyruvate dehydrogenase, E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
      0.556
CAZ96913.1
Conserved hypothetical periplasmic protein; Contains a signal peptide cleaved between the residues 18 and 19; Localized in the periplasmic space; Conserved hypothetical protein.
  
     0.541
sprE
The SprE protein could be involved in the gliding motility; Contains four tetratrico peptide repeats (TPRs). TPRs mediate proteinprotein interactions. TPR adopts a helixturnhelix arrangement, with adjacent TPR motifs packing in a parallel fashion, resulting in a spiral of repeating anti-parallel alpha-helices. SprE contains a prokaryotic lipoprotein signal peptide cleaved between the residues 20 and 21; Localized in the outer membrane; Function unclear.
  
     0.540
CAZ94574.1
Conserved hypothetical protein; Localized in the cytoplasm.
  
     0.539
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.