STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ94939.1Carbohydrate binding module belonging to the family CBM48. CBM48s usually bind to glycogen and are associated to GH13 modules or to AMP-activated protein kinases. The exact function of this isolated CBM48 is unknown. Localized in the cytoplasm; Specificity unclear. (99 aa)    
Predicted Functional Partners:
CAZ95304.1
Glycoside hydrolase, family GH13; Glycoside hydrolases hydrolyse the glycosidic bond between two or more carbohydrates or between a carbohydrate and a non-carbohydrate moiety. Belongs to the family 13 of the glycoside hydrolases; Specificity unclear.
 
  
 0.688
CAZ95466.1
Glycosyltransferase, family GT5; Glycosyltransferase catalyzes the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. This enzyme belongs to the family 5 of the glycosyltransferases. This protein of about 270 residues is conserved within the Bacteroidetes phylum and displays high similarity with the N-terminal region of glycogen synthase. Its exact specificity is unknown. Localized in the cytoplasm; Specificity unclear.
  
  
 0.666
glgA
Bacterial glycogen synthase, family GT5; Bacterial glycogen synthase synthesizes alpha-1,4-glucan chains found in bacterial glycogen using ADP-glucose. Belongs to the family 5 of glycosyltransferases (GT5). Localized in the cytoplasm; High confidence in function and specificity.
  
  
 0.666
otsAB
Trehalose-6-phosphate synthase/phosphatase, family GT20; This enzyme is involved in the biosynthesis of trehalose. It is a fusion protein between the trehalose-6-phosphate synthase (OtsA) and the trehalose-6-phosphate phosphatase (OtsB). Trehalose-6-phosphate synthase catalyzes the reaction: UDP-glucose + D-glucose 6-phosphate = UDP + alpha,alpha-trehalose 6-phosphate. It belongs to the family 20 of the glycosyltransferases (GT20). trehalose-6-phosphate phosphatase catalyzes the reaction: trehalose 6-phosphate + H2O = trehalose + phosphate. Localized in the cytoplasm; High confidence i [...]
  
 
 0.541
CAZ98297.1
Glycosyltransferase, family GT4; Glycosyltransferase catalyses the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds; Belongs to the family 4 of the glycosyltransferases (GT4); Localized in the cytoplasm; Specificity unclear.
  
 0.525
cefD
Isopenicillin N epimerase catalyzes the reversible isomerization between isopenicillin N and penicillin N. Uses pyridoxal phosphate as a cofactor. Belongs to class V of the aminotransferases. Localized in the cytoplasm; High confidence in function and specificity.
       0.473
algC
Phosphomannomutase/phosphoglucomutase; AlgC catalyzes the interconversion between mannose-6-phosphate and alpha-mannose-1-phosphate. It has also a phosphoglucomutase activity interconverting glucose-6-phosphate and alpha-glucose-1-phosphate. Likely involved in EPS/LPS biosynthesis. Binds one magnesium as cofactor. Localized in the cytoplasm; High confidence in function and specificity.
  
  
 0.459
pgcA
Phosphoglucomutase catalyzes the interconversion between glucose-6-phosphate and alpha-glucose-1-phosphate. It participates in both the breakdown and synthesis of glucose. Binds one magnesium as cofactor. Localized in the cytoplasm; High confidence in function and specificity.
  
  
 0.459
CAZ95171.1
Mannosyltransferase, family GT4; Mannosyltransferase catalyses the transfer of mannose from GDP-mannose to specific acceptor molecules, forming glycosidic bonds. Belongs to the family 4 of the glycosyltransferases. Likely involved in the biosynthesis of O-antigen. Localized in the cytoplasm; High confidence in function and specificity.
   
 0.430
CAZ95172.1
Glycosyltransferase, family GT4; Glycosyltransferase that could be involved in the exopolysaccharide or lipopolysaccharide biosynthesis; Belongs to the family 4 of glycosyltransferase (GT4); Localized in the cytoplasm; Specificity unclear.
   
 0.430
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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