STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAZ94947.1Protein belonging to the DUF389 family; Contains six transmembrane helices; Localized in the cytoplasmic membrane; Conserved hypothetical protein. (490 aa)    
Predicted Functional Partners:
manC
Mannose-1-phosphate guanylyltransferase, also known as GDP-mannose pyrophosphorylase, is Involved in the biosynthesis of exopolysaccharides. It catalyzes the reaction: GDP + alpha-D-mannose 1-phosphate = phosphate + GDP-mannose. Localized in the cytoplasm; High confidence in function and specificity.
       0.820
CAZ94949.1
SprT family protein; Conserved protein belonging to a family including SprT, a regulator of bolA gene in stationary phase. Displays a conserved HExxH motif reminiscent of the metallopeptidase zinc binding signature. Localized in the cytoplasm; Family membership.
       0.636
CAZ94951.1
Family M28 contains aminopeptidases and carboxypeptidases with two co-catalytic zinc ions. Each zinc ion is tetrahedrally co-ordinated, with three amino acid ligands plus activated water; one aspartate residue binds both metal ions. Contains a prokaryotic lipoprotein signal peptide cleaved between the residues 15 and 16; Localized in the outer and/or cytoplasmic membrane; Specificity unclear.
       0.444
CAZ94950.1
Belongs to the short-chain dehydrogenases/reductases (SDR) family, Glucose/ribitol dehydrogenase subfamily; Most dehydrogenases possess at least 2 domains, the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis; Localized in the cytoplasm; Family membership.
       0.404
Your Current Organism:
Zobellia galactanivorans
NCBI taxonomy Id: 63186
Other names: CCUG 47099, CIP 106680, Cytophaga drobachiensis, DSM 12802, Flavobacterium droebachense, Pseudomonas droebachense, Z. galactanivorans, Zobellia galactanivorans corrig. Barbeyron et al. 2001, Zobellia galactanovorans, strain Dsij
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