STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpsASimilar to Escherichia coli glycerol-3-phosphate dehydrogenase [NAD+] GpsA SW:GPDA_ECOLI (P37606) (339 aa) fasta scores: E(): 0, 84.5% id in 336 aa; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. (339 aa)    
Predicted Functional Partners:
plsY
Putative membrane protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
 
 0.994
glpD
Similar to Escherichia coli aerobic glycerol-3-phosphate dehydrogenase GlpD SW:GLPD_ECOLI (P13035) (501 aa) fasta scores: E(): 0, 75.1% id in 473 aa,and to Pseudomonas aeruginosa glycerol-3-phosphate dehydrogenase GlpD TR:AAG06972 (EMBL:L06231) (512 aa) fasta scores: E(): 0, 59.1% id in 464 aa. CDS is truncated at the N-terminus in comparison to other orthologues. Effect on function not known; was marked partial.
  
 0.978
b4041
Similar to Escherichia coli glycerol-3-phosphate acyltransferase PlsB SW:PLSB_ECOLI (P00482) (806 aa) fasta scores: E(): 0, 80.2% id in 802 aa; Belongs to the GPAT/DAPAT family.
  
 
 0.975
glpA
Similar to Escherichia coli anaerobic glycerol-3-phosphate dehydrogenase subunit A protein GlpA SW:GLPA_ECOLI (P13032) (542 aa) fasta scores: E(): 0, 77.8% id in 528 aa, and to Haemophilus influenzae anaerobic glycerol-3-phosphate dehydrogenase subunit A protein GlpA SW:GLPA_HAEIN (P43799) (563 aa) fasta scores: E(): 0, 70.5% id in 543 aa; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
   
 0.969
engA
Putative GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
  
 0.955
parF
Putative acyltransferase; Similar to Escherichia coli 1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC SW:PLSC_ECOLI (P26647) (245 aa) fasta scores: E(): 0, 71.7% id in 244 aa, and to Salmonella typhimurium 1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC SW:PLSC_SALTY (P26974) (245 aa) fasta scores: E(): 0, 71.7% id in 244 aa.
  
 
 0.950
glpC
Similar to Escherichia coli anaerobic glycerol-3-phosphate dehydrogenase subunit C protein GlpC SW:GLPC_ECOLI (P13034) (396 aa) fasta scores: E(): 0, 72.9% id in 406 aa, and to Haemophilus influenzae anaerobic glycerol-3-phosphate dehydrogenase subunit C protein GlpC SW:GLPC_HAEIN (P43801) (426 aa) fasta scores: E(): 0, 57.4% id in 411 aa.
    
  0.932
secB
Protein-export protein; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.
  
  
 0.896
irp1
Previously sequenced as Yersinia pestis yersiniabactin biosynthetic protein Irp1 TR:Q9Z373 (EMBL:AL031866) (3163 aa) fasta scores: E(): 0, 100.0% id in 3163 aa. Similar to Yersinia enterocolitica HMWP1 protein Irp1 TR:O54511 (EMBL:Y12527) (3161 aa) fasta scores: E(): 0, 97.9% id in 3163 aa.
  
 0.844
b4042
Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.
     
 0.841
Your Current Organism:
Yersinia pestis
NCBI taxonomy Id: 214092
Other names: Y. pestis CO92, Yersinia pestis CO92, Yersinia pestis str. CO92, Yersinia pestis strain CO92
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