STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ05836.1PFAM: Carbohydrate binding family 6; KEGG: pjd:Pjdr2_4054 S-layer domain protein. (1361 aa)    
Predicted Functional Partners:
ADQ07090.1
KEGG: ate:Athe_1353 hypothetical protein.
  
 
 0.740
ADQ07497.1
KEGG: csc:Csac_1496 hypothetical protein.
  
 
 0.740
ADQ05829.1
PFAM: extracellular solute-binding protein family 1; KEGG: dth:DICTH_1903 putative sugar uptake ABC transporter sugar-binding protein.
 
     0.688
ADQ05835.1
PFAM: S-layer domain protein; KEGG: cth:Cthe_1307 cellulosome anchoring protein, cohesin region.
       0.674
ADQ05834.1
KEGG: cpi:Cpin_5088 beta-phosphoglucomutase; TIGRFAM: beta-phosphoglucomutase; beta-phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase.
     
 0.543
ADQ07083.1
KEGG: csc:Csac_1920 hypothetical protein.
  
 
 0.531
ADQ07089.1
KEGG: csc:Csac_1920 hypothetical protein.
  
 
 0.531
ADQ07496.1
KEGG: ate:Athe_0926 hypothetical protein.
  
 
 0.531
ADQ05832.1
PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: cpy:Cphy_3314 kojibiose phosphorylase.
       0.529
ADQ05833.1
PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: cpy:Cphy_1874 kojibiose phosphorylase.
       0.529
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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