STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ06008.1KEGG: chy:CHY_2613 hypothetical protein. (250 aa)    
Predicted Functional Partners:
ADQ06009.1
KEGG: cbe:Cbei_4715 hypothetical protein.
 
     0.718
ADQ06496.1
KEGG: tme:Tmel_1462 hypothetical protein.
 
     0.652
ADQ06168.1
KEGG: ate:Athe_2472 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease.
  
     0.624
ADQ07827.1
PFAM: 3D domain protein; G5 domain protein; protein of unknown function DUF348; KEGG: ate:Athe_0535 3D domain protein.
   
    0.481
ADQ06516.1
KEGG: dae:Dtox_4246 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM.
  
  
 0.467
ADQ06006.1
Manually curated; TIGRFAM: transposase, IS605 OrfB family; KEGG: tte:TTE0715 transposase; PFAM: transposase IS605 OrfB; putative transposase IS891/IS1136/IS1341 family.
       0.428
ADQ06007.1
KEGG: csc:Csac_2584 resolvase domain-containing protein; manually curated; PFAM: Resolvase domain.
       0.428
ADQ06480.1
Helix-turn-helix domain protein; KEGG: chy:CHY_1694 putative prophage LambdaCh01, transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
     0.412
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.