Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADQ06071.1 | ADQ06072.1 | Calhy_0323 | Calhy_0324 | PFAM: Radical SAM domain protein; KEGG: ate:Athe_2518 radical SAM domain protein. | PFAM: RNA binding S1 domain protein; KEGG: ate:Athe_2517 RNA binding S1 domain protein. | 0.661 |
ADQ06071.1 | ADQ06073.1 | Calhy_0323 | Calhy_0325 | PFAM: Radical SAM domain protein; KEGG: ate:Athe_2518 radical SAM domain protein. | KEGG: ate:Athe_2516 hypothetical protein. | 0.623 |
ADQ06071.1 | ADQ06074.1 | Calhy_0323 | Calhy_0326 | PFAM: Radical SAM domain protein; KEGG: ate:Athe_2518 radical SAM domain protein. | KEGG: ate:Athe_2515 hypothetical protein. | 0.414 |
ADQ06072.1 | ADQ06071.1 | Calhy_0324 | Calhy_0323 | PFAM: RNA binding S1 domain protein; KEGG: ate:Athe_2517 RNA binding S1 domain protein. | PFAM: Radical SAM domain protein; KEGG: ate:Athe_2518 radical SAM domain protein. | 0.661 |
ADQ06072.1 | ADQ06073.1 | Calhy_0324 | Calhy_0325 | PFAM: RNA binding S1 domain protein; KEGG: ate:Athe_2517 RNA binding S1 domain protein. | KEGG: ate:Athe_2516 hypothetical protein. | 0.727 |
ADQ06072.1 | ADQ06074.1 | Calhy_0324 | Calhy_0326 | PFAM: RNA binding S1 domain protein; KEGG: ate:Athe_2517 RNA binding S1 domain protein. | KEGG: ate:Athe_2515 hypothetical protein. | 0.473 |
ADQ06073.1 | ADQ06071.1 | Calhy_0325 | Calhy_0323 | KEGG: ate:Athe_2516 hypothetical protein. | PFAM: Radical SAM domain protein; KEGG: ate:Athe_2518 radical SAM domain protein. | 0.623 |
ADQ06073.1 | ADQ06072.1 | Calhy_0325 | Calhy_0324 | KEGG: ate:Athe_2516 hypothetical protein. | PFAM: RNA binding S1 domain protein; KEGG: ate:Athe_2517 RNA binding S1 domain protein. | 0.727 |
ADQ06073.1 | ADQ06074.1 | Calhy_0325 | Calhy_0326 | KEGG: ate:Athe_2516 hypothetical protein. | KEGG: ate:Athe_2515 hypothetical protein. | 0.499 |
ADQ06074.1 | ADQ06071.1 | Calhy_0326 | Calhy_0323 | KEGG: ate:Athe_2515 hypothetical protein. | PFAM: Radical SAM domain protein; KEGG: ate:Athe_2518 radical SAM domain protein. | 0.414 |
ADQ06074.1 | ADQ06072.1 | Calhy_0326 | Calhy_0324 | KEGG: ate:Athe_2515 hypothetical protein. | PFAM: RNA binding S1 domain protein; KEGG: ate:Athe_2517 RNA binding S1 domain protein. | 0.473 |
ADQ06074.1 | ADQ06073.1 | Calhy_0326 | Calhy_0325 | KEGG: ate:Athe_2515 hypothetical protein. | KEGG: ate:Athe_2516 hypothetical protein. | 0.499 |
ADQ06074.1 | ADQ06075.1 | Calhy_0326 | Calhy_0327 | KEGG: ate:Athe_2515 hypothetical protein. | KEGG: ate:Athe_2514 hypothetical protein. | 0.523 |
ADQ06075.1 | ADQ06074.1 | Calhy_0327 | Calhy_0326 | KEGG: ate:Athe_2514 hypothetical protein. | KEGG: ate:Athe_2515 hypothetical protein. | 0.523 |