Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADQ06100.1KEGG: ate:Athe_2489 hypothetical protein. (101 aa)    
Predicted Functional Partners:
ADQ06099.1
Hypothetical protein; KEGG: ame:725793 centromere/kinetochore protein zw10.
       0.773
ADQ06101.1
KEGG: ate:Athe_2488 hypothetical protein.
       0.773
ADQ06102.1
KEGG: ate:Athe_2487 hypothetical protein.
       0.773
ADQ06098.1
KEGG: bah:BAMEG_2556 hypothetical protein.
       0.697
ADQ06103.1
KEGG: ate:Athe_2486 AAA ATPase; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase.
       0.664
ADQ06104.1
KEGG: ate:Athe_2485 hypothetical protein.
       0.664
ADQ06094.1
PFAM: Radical SAM domain protein; KEGG: ate:Athe_2493 radical SAM domain protein.
       0.641
ADQ06095.1
KEGG: ate:Athe_2492 hypothetical protein.
       0.641
ADQ06096.1
KEGG: ate:Athe_2491 hypothetical protein.
       0.641
ADQ06097.1
KEGG: ate:Athe_2490 hypothetical protein.
       0.641
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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