STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ06136.1PFAM: glycosyl transferase family 2; KEGG: csc:Csac_2631 glycosyl transferase family protein. (241 aa)    
Predicted Functional Partners:
ADQ06134.1
PFAM: Methyltransferase type 12; KEGG: csc:Csac_2632 methyltransferase type 11.
 
  
 0.813
ADQ06137.1
Hypothetical protein.
       0.778
ADQ06135.1
Hypothetical protein.
       0.719
ADQ06138.1
Hypothetical protein.
       0.715
ADQ06133.1
KEGG: csc:Csac_2633 hypothetical protein.
 
     0.705
ADQ06814.1
PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: dhd:Dhaf_4177 HAD superfamily hydrolase-like protein.
  
  
 0.681
ADQ06132.1
KEGG: csc:Csac_2634 hypothetical protein.
  
    0.641
ADQ06130.1
PFAM: type II secretion system protein E; KEGG: csc:Csac_2636 type II secretion system protein E.
  
    0.640
ADQ06129.1
KEGG: csc:Csac_2637 hypothetical protein.
       0.634
ADQ06131.1
KEGG: csc:Csac_2635 hypothetical protein.
       0.634
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.