STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ06206.1KEGG: ate:Athe_2298 efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; biotin/lipoyl attachment domain-containing protein. (663 aa)    
Predicted Functional Partners:
ADQ06208.1
PFAM: protein of unknown function DUF214; KEGG: ate:Athe_2296 protein of unknown function DUF214.
 
  
 0.960
ADQ06207.1
KEGG: csc:Csac_2447 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.933
ADQ06209.1
PFAM: S-layer domain protein; KEGG: csc:Csac_2445 S-layer domain-containing protein.
 
     0.902
ADQ05973.1
PFAM: protein of unknown function DUF214; KEGG: csc:Csac_0529 hypothetical protein.
 
  
 0.875
ADQ07505.1
KEGG: ate:Athe_0895 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.842
ADQ06205.1
KEGG: ate:Athe_2299 hypothetical protein.
       0.663
ADQ07766.1
TIGRFAM: DNA binding domain protein, excisionase family; KEGG: ate:Athe_0602 DNA binding domain protein, excisionase family.
  
     0.538
ADQ06258.1
KEGG: csc:Csac_0701 hypothetical protein.
 
  
 0.523
ADQ07932.1
PFAM: S-layer domain protein; KEGG: ate:Athe_0438 S-layer domain protein.
  
     0.504
ADQ08209.1
PFAM: protein of unknown function DUF214; KEGG: csc:Csac_0506 hypothetical protein.
  
  
 0.501
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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