STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ06216.1KEGG: csc:Csac_0189 IS605 family transposase OrfB; TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB. (383 aa)    
Predicted Functional Partners:
ADQ06215.1
PFAM: transposase IS200-family protein; KEGG: ate:Athe_2706 transposase IS200-family protein.
 
  
 0.960
ADQ05785.1
Manually curated; TIGRFAM: transposase, IS605 OrfB family; KEGG: csc:Csac_2648 IS605 family transposase OrfB; PFAM: transposase IS605 OrfB; putative transposase IS891/IS1136/IS1341 family.
  
     0.773
ADQ07833.1
KEGG: csc:Csac_0413 IS605 family transposase OrfB; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB.
  
     0.772
ADQ06006.1
Manually curated; TIGRFAM: transposase, IS605 OrfB family; KEGG: tte:TTE0715 transposase; PFAM: transposase IS605 OrfB; putative transposase IS891/IS1136/IS1341 family.
  
     0.733
ADQ06007.1
KEGG: csc:Csac_2584 resolvase domain-containing protein; manually curated; PFAM: Resolvase domain.
 
    0.701
ADQ06092.1
KEGG: mar:MAE_11230 hypothetical protein.
  
     0.452
ADQ06214.1
KEGG: csc:Csac_0221 hypothetical protein.
       0.420
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.