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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ06225.1KEGG: ate:Athe_2275 addiction module toxin, RelE/StbE family. (78 aa)    
Predicted Functional Partners:
ADQ06224.1
KEGG: csc:Csac_0230 hypothetical protein.
       0.773
ADQ06226.1
PFAM: transposase IS4 family protein; KEGG: csc:Csac_2323 transposase, IS4 family protein.
       0.529
ADQ06223.1
PFAM: DNA polymerase beta domain protein region; KEGG: csc:Csac_0229 DNA polymerase beta subunit.
       0.510
ADQ06222.1
PFAM: protein of unknown function DUF1646; KEGG: csc:Csac_0228 cation transporter-like protein.
       0.491
ADQ06266.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.483
ADQ07879.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.483
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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