STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ06228.1KEGG: ate:Athe_2268 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (491 aa)    
Predicted Functional Partners:
ADQ06231.1
PFAM: inner-membrane translocator; KEGG: ate:Athe_2265 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 0.978
ADQ06417.1
PFAM: inner-membrane translocator; KEGG: dtu:Dtur_0412 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 0.968
ADQ08046.1
PFAM: inner-membrane translocator; KEGG: mlb:MLBr_00397 putative transporter protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.966
rbsA
ABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
  
 
0.944
ADQ06232.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ate:Athe_2264 periplasmic binding protein/LacI transcriptional regulator.
 0.929
ADQ08044.1
PFAM: inner-membrane translocator; KEGG: gva:HMPREF0424_1337 amino acid or sugar ABC transport system, permease protein.
 
 0.926
ADQ06235.1
PFAM: extracellular solute-binding protein family 1; KEGG: tle:Tlet_1140 extracellular solute-binding protein.
    
  0.914
ADQ06236.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: str:Sterm_0718 binding-protein-dependent transport systems inner membrane component.
  
 
  0.911
ADQ06419.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: dth:DICTH_0295 ABC sugar transporter, periplasmic ligand binding protein.
 0.909
ADQ06404.1
PFAM: inner-membrane translocator; KEGG: dth:DICTH_0298 ribose transport system permease protein RbsC.
 
 0.853
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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