STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ06259.1KEGG: csc:Csac_0702 ATPase; PFAM: ATPase associated with various cellular activities AAA_3; SMART: AAA ATPase. (327 aa)    
Predicted Functional Partners:
ADQ06260.1
KEGG: csc:Csac_0703 hypothetical protein.
 
  
 0.956
ADQ06262.1
Protein of unknown function DUF1355; KEGG: csc:Csac_0705 von Willebrand factor, type A; PFAM: protein of unknown function DUF1355; von Willebrand factor type A; SMART: von Willebrand factor type A.
 
  
 0.927
ADQ06261.1
KEGG: csc:Csac_0704 hypothetical protein.
 
  
 0.870
ADQ06257.1
PFAM: ABC-2 type transporter; KEGG: csc:Csac_0700 ABC-2 type transporter.
 
    0.828
ADQ06258.1
KEGG: csc:Csac_0701 hypothetical protein.
       0.786
ADQ06256.1
KEGG: csc:Csac_0699 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    0.750
ADQ06255.1
KEGG: csc:Csac_0698 hypothetical protein.
  
    0.704
ADQ07921.1
PFAM: protein of unknown function DUF58; KEGG: ate:Athe_0449 protein of unknown function DUF58.
 
  
 0.567
ADQ06254.1
KEGG: csc:Csac_0697 hypothetical protein.
       0.469
gltX
glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
     
 0.463
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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