STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
araBL-ribulokinase; KEGG: ate:Athe_2229 L-ribulokinase; TIGRFAM: L-ribulokinase; PFAM: Carbohydrate kinase, FGGY-like. (556 aa)    
Predicted Functional Partners:
ADQ06281.1
PFAM: class II aldolase/adducin family protein; KEGG: csc:Csac_0723 L-ribulose-5-phosphate 4-epimerase.
 
 
 0.992
ADQ06402.1
L-fucose isomerase _2 domain protein; Catalyzes the conversion of L-arabinose to L-ribulose.
 
 
 0.984
ADQ05949.1
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: csc:Csac_0598 xylose isomerase domain-containing protein.
  
  
 0.912
ADQ07404.1
TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: ate:Athe_1047 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase.
 
   
 0.910
ADQ05894.1
PFAM: PfkB domain protein; KEGG: csc:Csac_2720 ribokinase-like domain-containing protein.
   
 
 0.810
ADQ06244.1
PFAM: PfkB domain protein; KEGG: tpd:Teth39_1972 ribokinase-like domain-containing protein; Belongs to the carbohydrate kinase PfkB family.
   
 
 0.810
ADQ07734.1
TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; KEGG: ate:Athe_0632 sugar-phosphate isomerase, RpiB/LacA/LacB family; PFAM: Ribose/galactose isomerase.
    
  0.808
ADQ07595.1
PFAM: 3-dehydroquinate synthase; KEGG: ate:Athe_0802 glycerol-1-phosphate dehydrogenase (NAD(P)(+)).
 
  
 0.782
ADQ06280.1
Transcriptional regulator, GntR family with LacI sensor; KEGG: csc:Csac_0722 regulatory protein GntR, HTH; PFAM: regulatory protein GntR HTH; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein GntR HTH.
 
  
 0.619
ADQ06018.1
PFAM: class II aldolase/adducin family protein; KEGG: csc:Csac_0425 class II aldolase/adducin family protein.
 
  
 0.521
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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