STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ06364.1PFAM: CheC domain protein; KEGG: ate:Athe_2134 CheC domain protein. (158 aa)    
Predicted Functional Partners:
ADQ06338.1
KEGG: ate:Athe_2159 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver.
  
 
 0.906
ADQ06704.1
KEGG: ate:Athe_1771 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver.
  
 
 0.906
ADQ08149.1
KEGG: ate:Athe_0170 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver.
  
 
 0.904
ADQ06365.1
RNA methyltransferase, TrmH family, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.
       0.750
ADQ06354.1
PFAM: protein of unknown function DUF342; KEGG: ate:Athe_2143 protein of unknown function DUF342.
  
     0.740
ADQ07351.1
PFAM: Protein of unknown function DUF2225; KEGG: ate:Athe_1100 hypothetical protein.
 
     0.735
ADQ06366.1
KEGG: ate:Athe_2132 DegV family protein; TIGRFAM: degV family protein; PFAM: DegV family protein.
       0.606
ADQ06800.1
KEGG: ate:Athe_1677 anti-sigma-28 factor, FlgM; TIGRFAM: Anti-sigma-28 factor FlgM family protein; PFAM: Anti-sigma-28 factor FlgM family protein.
  
     0.542
ADQ05948.1
PFAM: Flagellar protein FlgJ-like; KEGG: ate:Athe_2336 hypothetical protein.
  
     0.534
ADQ06326.1
KEGG: ate:Athe_2171 H+-transporting two-sector ATPase, E subunit.
 
     0.521
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.