STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsA-3ABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (501 aa)    
Predicted Functional Partners:
ADQ06417.1
PFAM: inner-membrane translocator; KEGG: dtu:Dtur_0412 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 0.989
ADQ06231.1
PFAM: inner-membrane translocator; KEGG: ate:Athe_2265 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 0.967
ADQ08046.1
PFAM: inner-membrane translocator; KEGG: mlb:MLBr_00397 putative transporter protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.966
ADQ06419.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: dth:DICTH_0295 ABC sugar transporter, periplasmic ligand binding protein.
 0.941
ADQ08044.1
PFAM: inner-membrane translocator; KEGG: gva:HMPREF0424_1337 amino acid or sugar ABC transport system, permease protein.
 
 0.938
ADQ06232.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ate:Athe_2264 periplasmic binding protein/LacI transcriptional regulator.
 0.914
ADQ06409.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pjd:Pjdr2_5507 binding-protein-dependent transport systems inner membrane component.
     
  0.900
ADQ06404.1
PFAM: inner-membrane translocator; KEGG: dth:DICTH_0298 ribose transport system permease protein RbsC.
 
 0.859
ADQ06405.1
PFAM: inner-membrane translocator; KEGG: cpy:Cphy_0582 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
 0.824
ADQ05877.1
PFAM: inner-membrane translocator; KEGG: bbe:BBR47_06820 galactoside ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.797
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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