STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ06480.1Helix-turn-helix domain protein; KEGG: chy:CHY_1694 putative prophage LambdaCh01, transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein. (147 aa)    
Predicted Functional Partners:
ADQ06481.1
TIGRFAM: DNA binding domain protein, excisionase family; KEGG: mrb:Mrub_1410 DNA binding domain-containing protein, excisionase family.
       0.773
ADQ06482.1
KEGG: ptm:GSPATT00030080001 hypothetical protein.
       0.592
ADQ06479.1
Hypothetical protein; KEGG: cco:CCC13826_0356 [NiFe] hydrogenase maturation protein HypF.
       0.555
ADQ06488.1
KEGG: rpi:Rpic_2326 hypothetical protein.
 
     0.543
ADQ06483.1
KEGG: fba:FIC_00947 regulatory protein, MarR.
       0.422
ADQ06484.1
Hypothetical protein; KEGG: mmu:226519 laminin, gamma 1.
       0.422
ADQ06485.1
PFAM: Gp157 family protein; KEGG: cbo:CBO2384 hypothetical protein.
       0.422
ADQ07672.1
KEGG: ate:Athe_0707 L-fucose isomerase-like protein.
  
     0.413
ADQ06008.1
KEGG: chy:CHY_2613 hypothetical protein.
  
     0.412
ADQ06486.1
KEGG: cth:Cthe_1651 hypothetical protein.
       0.401
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.