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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ06489.1KEGG: cbf:CLI_3295 hypothetical protein. (180 aa)    
Predicted Functional Partners:
ADQ06490.1
KEGG: drm:Dred_2612 hypothetical protein.
       0.773
ADQ06488.1
KEGG: rpi:Rpic_2326 hypothetical protein.
       0.618
ADQ06494.1
TIGRFAM: phage transcriptional regulator, RinA family; KEGG: chy:CHY_1683 prophage LambdaCh01, RinA family protein phage transcriptional regulator.
       0.611
ADQ06491.1
KEGG: mbr:MONBRDRAFT_24831 hypothetical protein.
       0.610
ADQ06492.1
KEGG: afr:AFE_1125 hypothetical protein.
       0.610
ADQ06493.1
PFAM: endodeoxyribonuclease RusA; KEGG: ate:Athe_2445 endodeoxyribonuclease RusA.
       0.610
ADQ06487.1
KEGG: mno:Mnod_3561 hypothetical protein.
       0.598
ADQ06485.1
PFAM: Gp157 family protein; KEGG: cbo:CBO2384 hypothetical protein.
       0.402
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.