Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADQ06498.1KEGG: dae:Dtox_4230 hypothetical protein. (563 aa)    
Predicted Functional Partners:
ADQ06509.1
KEGG: ere:EUBREC_2099 hypothetical protein.
 
     0.847
ADQ06512.1
KEGG: dae:Dtox_4245 phage tail tape measure protein, TP901 family; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region.
 
     0.796
ADQ06497.1
KEGG: cbe:Cbei_1637 hypothetical protein.
       0.792
ADQ06496.1
KEGG: tme:Tmel_1462 hypothetical protein.
     
 0.786
ADQ06499.1
KEGG: tit:Thit_1391 hypothetical protein.
       0.773
ADQ06500.1
Hypothetical protein.
       0.773
ADQ06495.1
KEGG: tit:Thit_1396 hypothetical protein.
       0.763
ADQ06519.1
KEGG: gym:GYMC10_5393 hypothetical protein.
 
     0.737
ADQ05898.1
PFAM: glycoside hydrolase family 28; KEGG: ate:Athe_2380 galacturan 1,4-alpha-galacturonidase; Belongs to the glycosyl hydrolase 28 family.
  
 
 0.732
ADQ06886.1
PFAM: glycoside hydrolase family 28; KEGG: csc:Csac_0664 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 28 family.
  
 
 0.732
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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