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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ06510.1KEGG: ere:EUBREC_2098 hypothetical protein. (149 aa)    
Predicted Functional Partners:
ADQ06509.1
KEGG: ere:EUBREC_2099 hypothetical protein.
       0.761
ADQ06511.1
KEGG: ere:EUBREC_2097 hypothetical protein.
       0.759
ADQ06506.1
KEGG: dae:Dtox_4238 hypothetical protein.
       0.744
ADQ06507.1
KEGG: dae:Dtox_4239 hypothetical protein.
       0.744
ADQ06508.1
Hypothetical protein; KEGG: bsu:BSU26089 conserved hypothetical protein; skin element.
       0.744
ADQ06504.1
KEGG: dae:Dtox_4236 hypothetical protein.
       0.742
ADQ06505.1
Manually curated; KEGG: dae:Dtox_4237 hypothetical protein.
       0.742
ADQ06503.1
KEGG: cbe:Cbei_1641 hypothetical protein.
       0.691
ADQ06502.1
KEGG: amt:Amet_2575 hypothetical protein.
       0.601
ADQ06501.1
KEGG: tit:Thit_1389 hypothetical protein.
       0.580
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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