Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ06516.1KEGG: dae:Dtox_4246 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM. (218 aa)    
Predicted Functional Partners:
ADQ06520.1
PFAM: Baseplate J family protein; KEGG: gym:GYMC10_5392 baseplate J family protein.
 
 
 0.994
ADQ06519.1
KEGG: gym:GYMC10_5393 hypothetical protein.
 
 
 0.993
ADQ06521.1
KEGG: dhd:Dhaf_4813 hypothetical protein.
 
 
 0.992
ADQ06509.1
KEGG: ere:EUBREC_2099 hypothetical protein.
 
 
 0.985
ADQ06517.1
KEGG: ere:EUBREC_2093 hypothetical protein.
 
     0.951
ADQ07827.1
PFAM: 3D domain protein; G5 domain protein; protein of unknown function DUF348; KEGG: ate:Athe_0535 3D domain protein.
  
  
 0.944
ADQ06518.1
KEGG: dae:Dtox_4248 hypothetical protein.
       0.796
ADQ06522.1
KEGG: cpy:Cphy_0795 hypothetical protein.
  
    0.767
ADQ06512.1
KEGG: dae:Dtox_4245 phage tail tape measure protein, TP901 family; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region.
 
   
 0.751
ADQ06523.1
KEGG: fba:FIC_01264 GTP-binding protein TypA/BipA.
       0.746
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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