STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ06545.1PFAM: Coat F domain protein; KEGG: ate:Athe_1976 coat F domain protein. (93 aa)    
Predicted Functional Partners:
ADQ06544.1
KEGG: ate:Athe_1977 hypothetical protein.
  
    0.730
ADQ07844.1
PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: csc:Csac_2459 dinitrogenase iron-molybdenum cofactor biosynthesis protein.
  
     0.586
ADQ07448.1
KEGG: ate:Athe_0997 hypothetical protein.
  
   
 0.585
ADQ05866.1
KEGG: ate:Athe_0104 hypothetical protein.
  
     0.565
ADQ07196.1
KEGG: ate:Athe_1246 hypothetical protein.
  
     0.560
ADQ07432.1
KEGG: ate:Athe_1013 hypothetical protein.
  
    0.546
ADQ06010.1
KEGG: csc:Csac_0417 hypothetical protein.
  
     0.532
ADQ06771.1
KEGG: csc:Csac_2247 hypothetical protein.
  
     0.530
ADQ06543.1
PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding domain 1 protein; KEGG: ate:Athe_1978 ErfK/YbiS/YcfS/YnhG family protein.
       0.522
ADQ05942.1
PFAM: S-layer domain protein; KEGG: ate:Athe_2342 S-layer domain protein.
  
     0.507
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.