STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ06546.1PFAM: GCN5-related N-acetyltransferase; KEGG: ate:Athe_1975 GCN5-related N-acetyltransferase. (205 aa)    
Predicted Functional Partners:
ADQ05816.1
PFAM: Protein of unknown function YycH; KEGG: ate:Athe_0084 hypothetical protein.
  
     0.628
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
     
 0.496
ADQ08247.1
KEGG: csc:Csac_0079 CRISPR-associated RAMP Csm5 family protein; TIGRFAM: CRISPR-associated RAMP protein, Csm5 family; PFAM: protein of unknown function DUF324.
  
     0.442
ADQ05795.1
KEGG: csc:Csac_2571 hypothetical protein.
  
     0.430
ADQ08132.1
Manually curated; KEGG: ate:Athe_0193 hypothetical protein.
  
     0.421
ADQ05942.1
PFAM: S-layer domain protein; KEGG: ate:Athe_2342 S-layer domain protein.
  
     0.409
ADQ06811.1
KEGG: csc:Csac_1682 methyltransferase type 11; PFAM: glycosyl transferase group 1; TPR repeat-containing protein; glycosyl transferase family 2; SMART: Tetratricopeptide repeat.
 
 
 0.405
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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