Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ADQ06571.1KEGG: ate:Athe_1940 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (261 aa)    
Predicted Functional Partners:
ADQ06570.1
KEGG: ate:Athe_1941 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.
 
 0.999
ADQ06569.1
KEGG: ate:Athe_1942 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3.
 
 
 0.965
ADQ06208.1
PFAM: protein of unknown function DUF214; KEGG: ate:Athe_2296 protein of unknown function DUF214.
 
 
    0.703
ADQ06572.1
PFAM: protein of unknown function DUF6 transmembrane; KEGG: ate:Athe_1939 protein of unknown function DUF6 transmembrane.
 
     0.614
ADQ07505.1
KEGG: ate:Athe_0895 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    
0.600
ADQ05973.1
PFAM: protein of unknown function DUF214; KEGG: csc:Csac_0529 hypothetical protein.
 
 
    0.599
ADQ08285.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; extracellular solute-binding protein family 3; PAS fold domain protein; PAS fold-3 domain protein; KEGG: ate:Athe_2740 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; extracellular solute-binding protein family 3; PAS domain containing protein; PAC repeat-containing protein.
  
 
 0.590
ADQ06568.1
PFAM: S-layer domain protein; KEGG: ate:Athe_1943 S-layer domain protein.
       0.492
ADQ06573.1
PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: ate:Athe_1938 beta-lactamase domain protein.
       0.492
ADQ06278.1
TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: ate:Athe_2238 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein.
  
 
 0.466
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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