Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ06620.1KEGG: ate:Athe_1893 protein of unknown function DUF1121. (213 aa)    
Predicted Functional Partners:
ADQ07253.1
TIGRFAM: sulfite reductase, subunit A; KEGG: tit:Thit_0329 sulfite reductase, subunit A.
  
 
 0.826
ADQ06618.1
PFAM: transport system permease protein; KEGG: ate:Athe_1895 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.746
ADQ06619.1
KEGG: ate:Athe_1894 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.746
ADQ06617.1
PFAM: periplasmic binding protein; KEGG: ate:Athe_1896 periplasmic binding protein.
       0.671
ADQ06616.1
PFAM: glycine cleavage H-protein; KEGG: ate:Athe_1897 glycine cleavage H-protein.
       0.549
ADQ06615.1
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: ate:Athe_1898 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
       0.483
ADQ06621.1
KEGG: ate:Athe_1892 NLP/P60 protein; PFAM: NLP/P60 protein; SH3 type 3 domain protein; SMART: SH3 domain protein.
       0.437
ADQ06614.1
PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: ate:Athe_1899 cytochrome c biogenesis protein transmembrane region.
       0.420
ADQ07822.1
KEGG: ate:Athe_0540 hypothetical protein.
  
     0.405
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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