Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADQ06709.1KEGG: ate:Athe_1766 hypothetical protein. (250 aa)    
Predicted Functional Partners:
ADQ07290.1
KEGG: ate:Athe_1160 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
     0.867
ADQ06708.1
KEGG: ate:Athe_1767 protein of unknown function DUF1393.
 
     0.831
ADQ06710.1
PFAM: Sporulation protein YtxC; KEGG: ate:Athe_1765 sporulation protein YtxC.
 
     0.717
ADQ07585.1
PFAM: NUDIX hydrolase; KEGG: ate:Athe_0812 NUDIX hydrolase.
  
     0.653
ADQ07946.1
Protein of unknown function DUF710; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.
  
     0.637
ADQ06547.1
KEGG: ate:Athe_1973 hypothetical protein.
  
     0.603
ADQ07561.1
KEGG: ate:Athe_0834 hypothetical protein.
  
     0.571
ADQ06456.1
PFAM: Domain of unknown function DUF1934; KEGG: ate:Athe_2037 domain of unknown function DUF1934.
  
     0.515
ADQ07132.1
KEGG: ate:Athe_1311 hypothetical protein.
  
     0.494
ADQ06371.1
KEGG: ate:Athe_2127 hypothetical protein.
  
     0.492
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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