Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ06715.1KEGG: ate:Athe_1760 4Fe-4S ferredoxin iron-sulfur binding domain protein. (67 aa)    
Predicted Functional Partners:
ADQ06716.1
PFAM: protein of unknown function DUF156; KEGG: ate:Athe_1759 protein of unknown function DUF156.
       0.752
ADQ07144.1
KEGG: ate:Athe_1299 hydrogenase, Fe-only; TIGRFAM: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; iron hydrogenase small subunit.
   
 
 0.741
ADQ06771.1
KEGG: csc:Csac_2247 hypothetical protein.
  
     0.671
ADQ06266.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
     0.617
ADQ05780.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
     0.577
ADQ07830.1
KEGG: ate:Athe_0532 hypothetical protein.
  
     0.543
ADQ07973.1
PFAM: extracellular solute-binding protein family 5; KEGG: csc:Csac_0261 extracellular solute-binding protein.
  
    0.537
ADQ06010.1
KEGG: csc:Csac_0417 hypothetical protein.
  
     0.530
ADQ05774.1
Transposase; KEGG: ate:Athe_0076 transposase; TIGRFAM: transposase; transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB.
  
     0.513
ADQ07148.1
PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: ate:Athe_1295 NADH dehydrogenase (ubiquinone) 24 kDa subunit.
   
 
 0.510
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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