Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ06792.1PFAM: cobalt transport protein; KEGG: ate:Athe_1686 cobalt transport protein. (262 aa)    
Predicted Functional Partners:
ecfA
ABC transporter related protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 0.999
ecfA-2
ABC transporter related protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 0.998
ADQ06045.1
PFAM: BioY protein; KEGG: ate:Athe_2544 BioY protein.
 
 0.972
ADQ08270.1
PFAM: BioY protein; KEGG: ate:Athe_2725 BioY protein.
 
 0.960
ADQ07534.1
KEGG: ate:Athe_0860 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.936
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.933
ADQ06708.1
KEGG: ate:Athe_1767 protein of unknown function DUF1393.
 
 
 0.872
ADQ07969.1
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: csc:Csac_0265 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
  
 
 0.846
ADQ05787.1
KEGG: ate:Athe_0037 proton-coupled thiamine transporter YuaJ; TIGRFAM: proton-coupled thiamine transporter YuaJ; PFAM: thiamine transporter YuaJ.
  
  
 0.659
ADQ07537.1
PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: cac:CAC0771 cobalt transport protein CbiM.
  
  
 0.585
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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